Shouldn't be a problem.  We're just bundling the comet binaries in TPP --
so no modifications.  You may encounter a small change with the parameters
but that's easily fixed.

-Joe



On Mon, Apr 7, 2014 at 2:48 PM, Brian Hampton <[email protected]> wrote:

> Hello,
>
> A new version of Comet was released recently.  Is there any problem with
> replacing the previous version of Comet in tpp/bin with the new binary?  I
> am aware only of Tandem being modified for e.g. plug-able scoring so it
> (the version packaged with the TPP) is different than the ones released via
> the GPM.
>
> Thanks in advance,
>
> Brian
>
> Brian Hampton
> Protein Analysis Lab
> Center for Vascular and Inflammatory Diseases
> University of Maryland School of Medicine
> 655 West Baltimore Street BRB 7-018
> Baltimore  MD  21201
> V: 410-706-8207
>
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-- 
Joe Slagel
Institute for Systems Biology
[email protected]
(206) 732-1362

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