Thanks Joe and Luis!

Cheers,
Brian


On Mon, Apr 7, 2014 at 5:53 PM, Luis Mendoza <
[email protected]> wrote:

> Joe is correct.  Just generate a new params file (by typing "comet -p" on
> the command-line, for example), and use it as a new template.  Using an old
> params file with the new comet may throw an error.
> --Luis
>
>
>
> On Mon, Apr 7, 2014 at 2:50 PM, Joseph Slagel <
> [email protected]> wrote:
>
>> Shouldn't be a problem.  We're just bundling the comet binaries in TPP --
>> so no modifications.  You may encounter a small change with the parameters
>> but that's easily fixed.
>>
>> -Joe
>>
>>
>>
>> On Mon, Apr 7, 2014 at 2:48 PM, Brian Hampton <[email protected]>wrote:
>>
>>> Hello,
>>>
>>> A new version of Comet was released recently.  Is there any problem with
>>> replacing the previous version of Comet in tpp/bin with the new binary?  I
>>> am aware only of Tandem being modified for e.g. plug-able scoring so it
>>> (the version packaged with the TPP) is different than the ones released via
>>> the GPM.
>>>
>>> Thanks in advance,
>>>
>>> Brian
>>>
>>> Brian Hampton
>>> Protein Analysis Lab
>>> Center for Vascular and Inflammatory Diseases
>>> University of Maryland School of Medicine
>>> 655 West Baltimore Street BRB 7-018
>>> Baltimore  MD  21201
>>> V: 410-706-8207
>>>
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>>
>>
>>
>> --
>> Joe Slagel
>> Institute for Systems Biology
>> [email protected]
>> (206) 732-1362
>>
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