Hi everyone,
I'm currently working on about 20 different mass spec runs and am new to
using the TPP. I saw there are two approaches to using InterProphet. One is:
Search 1->...->InterProphet->downstream analysis
Search 2->...->InterProphet->downstream analysis
Search 3->...->InterProphet->downstream analysis
Search 4->...->InterProphet->downstream analysis
The other is:
Search 1----------
\
Search 2----------- InterProphet->downstream analysis
/
Search N-----------
Hopefully that little ansi diagram renders in however you are viewing this.
If not, it's basically showing the different of combining all your analyses
in a single interprophet run versus interprophet after every analysis. Is
there any difference to the 2 approaches?
Chris
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