Hi, same here. I compiled and installed the boost libraries 1.55.0 on 
Ubuntu 14.04. 
The compilation of TPP 4.7.1 stops with
[ERROR] Boost libary build failed (missing 
/home/rob/Downloads/tpp_4.7.1/src/../build/Ubuntu-x86_64/boost/lib/libboost_thread.a),
 
please report the results of manually running the following commands:

Any ideas (downgrade to 12.04 is not an option for me)?

Best Regards,

obert



Am Montag, 12. Mai 2014 10:42:39 UTC-5 schrieb Will Fondrie:
>
> Hello, 
>
> I am trying to install TPP on a machine running 64bit Ubuntu 14.04 LTS. I 
> keep running into the error below when I try compiling using the make 
> command. 
> I've tried using gcc-4.8 and gcc-4.4 as well as boost 1.54 and 1.55 with 
> no luck.
>
> Thank you for the help.
>
> -Will
>
> building boost libraries...
> Performing configuration checks
>
>     - zlib                     : yes (cached)
>     - has_icu builds           : yes (cached)
>
> Component configuration:
>
>     - atomic                   : not building
>     - chrono                   : not building
>     - context                  : not building
>     - coroutine                : not building
>     - date_time                : building
>     - exception                : not building
>     - filesystem               : building
>     - graph                    : not building
>     - graph_parallel           : not building
>     - iostreams                : building
>     - locale                   : not building
>     - log                      : not building
>     - math                     : not building
>     - mpi                      : not building
>     - program_options          : building
>     - python                   : not building
>     - random                   : not building
>     - regex                    : building
>     - serialization            : building
>     - signals                  : not building
>     - system                   : not building
>     - test                     : not building
>     - thread                   : building
>     - timer                    : not building
>     - wave                     : not building
>
> In file included from ./boost/atomic.hpp:12,
>                  from ./boost/thread/pthread/once_atomic.hpp:20,
>                  from ./boost/thread/once.hpp:20,
>                  from libs/thread/src/pthread/./once_atomic.cpp:9,
>                  from libs/thread/src/pthread/once.cpp:8:
> ./boost/atomic/atomic.hpp:202: error: ‘uintptr_t’ was not declared in this 
> scope
> ./boost/atomic/atomic.hpp:202: error: template argument 1 is invalid
> ./boost/atomic/atomic.hpp:202: error: invalid type in declaration before 
> ‘;’ token
> In file included from ./boost/atomic.hpp:12,
>                  from ./boost/thread/pthread/once_atomic.hpp:20,
>                  from ./boost/thread/once.hpp:20,
>                  from libs/thread/src/pthread/thread.cpp:17:
> ./boost/atomic/atomic.hpp:202: error: ‘uintptr_t’ was not declared in this 
> scope
> ./boost/atomic/atomic.hpp:202: error: template argument 1 is invalid
> ./boost/atomic/atomic.hpp:202: error: invalid type in declaration before 
> ‘;’ token
> ./boost/system/error_code.hpp:222: warning: 
> ‘boost::system::posix_category’ defined but not used
> ./boost/system/error_code.hpp:223: warning: ‘boost::system::errno_ecat’ 
> defined but not used
> ./boost/system/error_code.hpp:224: warning: ‘boost::system::native_ecat’ 
> defined but not used
> ...failed updating 2 targets...
> Command exited with non-zero status 1
> 1.03user 0.09system 0:00.97elapsed 116%CPU (0avgtext+0avgdata 
> 164912maxresident)k
> 0inputs+32outputs (0major+62861minor)pagefaults 0swaps
> [ERROR] Boost libary build failed (missing 
> /usr/local/src/TPP-4.7.0/trans_proteomic_pipeline/src/../build/Ubuntu-x86_64/boost/lib/libboost_thread.a),
>  
> please report the results of manually running the following commands:
> cd 
> /usr/local/src/TPP-4.7.0/trans_proteomic_pipeline/src/../extern/boost_1_54_0; 
> time 
> /usr/local/src/TPP-4.7.0/trans_proteomic_pipeline/src/../extern/boost_1_54_0/tools/build/v2/engine/bin.linuxx86_64/bjam
>  
> -q -d0 
> --stagedir=/usr/local/src/TPP-4.7.0/trans_proteomic_pipeline/src/../build/Ubuntu-x86_64/boost
>  
> --build-dir=/usr/local/src/TPP-4.7.0/trans_proteomic_pipeline/src/../build/Ubuntu-x86_64/boost/obj
>  
> --layout=system --build-type=minimal -j3 variant=release link=static 
> runtime-link=shared --with-filesystem --with-date_time --with-iostreams 
> --with-program_options --with-regex --with-serialization --with-thread stage
> /bin/sh: 1: exit: Illegal number: -1
> make: *** [boost-build-libs] Error 2
>
> Running the commands above results in:
>
>
> Performing configuration checks
>
>     - zlib                     : yes (cached)
>     - has_icu builds           : yes (cached)
>
> Component configuration:
>
>     - atomic                   : not building
>     - chrono                   : not building
>     - context                  : not building
>     - coroutine                : not building
>     - date_time                : building
>     - exception                : not building
>     - filesystem               : building
>     - graph                    : not building
>     - graph_parallel           : not building
>     - iostreams                : building
>     - locale                   : not building
>     - log                      : not building
>     - math                     : not building
>     - mpi                      : not building
>     - program_options          : building
>     - python                   : not building
>     - random                   : not building
>     - regex                    : building
>     - serialization            : building
>     - signals                  : not building
>     - system                   : not building
>     - test                     : not building
>     - thread                   : building
>     - timer                    : not building
>     - wave                     : not building
>
> In file included from ./boost/atomic.hpp:12,
>                  from ./boost/thread/pthread/once_atomic.hpp:20,
>                  from ./boost/thread/once.hpp:20,
>                  from libs/thread/src/pthread/./once_atomic.cpp:9,
>                  from libs/thread/src/pthread/once.cpp:8:
> ./boost/atomic/atomic.hpp:202: error: ‘uintptr_t’ was not declared in this 
> scope
> ./boost/atomic/atomic.hpp:202: error: template argument 1 is invalid
> ./boost/atomic/atomic.hpp:202: error: invalid type in declaration before 
> ‘;’ token
> In file included from ./boost/atomic.hpp:12,
>                  from ./boost/thread/pthread/once_atomic.hpp:20,
>                  from ./boost/thread/once.hpp:20,
>                  from libs/thread/src/pthread/thread.cpp:17:
> ./boost/atomic/atomic.hpp:202: error: ‘uintptr_t’ was not declared in this 
> scope
> ./boost/atomic/atomic.hpp:202: error: template argument 1 is invalid
> ./boost/atomic/atomic.hpp:202: error: invalid type in declaration before 
> ‘;’ token
> ./boost/system/error_code.hpp:222: warning: 
> ‘boost::system::posix_category’ defined but not used
> ./boost/system/error_code.hpp:223: warning: ‘boost::system::errno_ecat’ 
> defined but not used
> ./boost/system/error_code.hpp:224: warning: ‘boost::system::native_ecat’ 
> defined but not used
> ...failed updating 2 targets...
>
> real    0m0.997s
> user    0m1.062s
> sys    0m0.099s
>
>

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