Announcing the official release of Trans-Proteomic Pipeline (TPP) 4.8.0
"PHILAE"

We are proud to offer a update to the Trans-Proteomic Pipeline (TPP)
software, release 4.8.0 (4.8 revision).  The software is available for
Windows as well as Linux (and unofficially) through OSX source from all the
usual locations (please see the section below, "Getting the software").
Most users are recommended to use the Windows installer, which installs and
configures the TPP and other required software (such as a web server).  For
advanced users who need to customize the TPP, or for those who run on Linux
or OS X, you can download the source code.


== Release Notes ==

* Release notes on the most important new features, changes, and known
issues are available at:

"http://tools.proteomecenter.org/wiki/index.php?title=TPP:4.8
.0_Release_Notes"


== Getting the TPP Software ==

* Download the TPP version 4.8.0 native windows installer from the Sashimi
SourceForge project file release page:

  "http://sourceforge.net/
<http://goog_2056063534>http://sourceforge.net/projects/sashimi/files/Trans-Proteomic
Pipeline (TPP)"

* Everyone is encouraged to read and contribute to our wiki, at
  "http://tools.proteomecenter.org/wiki/";

* For guides to installing and using our software, please see our wiki:
  "http://tools.proteomecenter.org/wiki/index.php?title=Software:TPP";

* For downloading the source code, please go to the following link:
  "http://sourceforge.net/projects/sashimi/files/"; and find the 4.8.0
source code .zip package;
or, check out the code directly from svn:
  "svn co svn://svn.code.sf.net/p/sashimi/code/tags/release_4-8-0"

For building from source, please refer to the README and INSTALL files in src/
directory of TPP as well as the wiki.


== Acknowledgements ==

The TPP Team: Luis, David, Mike, and Joe, plus all other developers who
contributed to this release from the ISB.  Thanks to developers and users
from the TPP's user community who also provide feedback and code
contributions.


-- 
Joe Slagel
Institute for Systems Biology
[email protected]

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