I get the following error when i tried to use tandem to search my Ecoli sample. I appreciate any idea of why this is happening and how to resolve it.
*EXECUTING: cd c:/Inetpub/wwwroot/ISB/data/Ecoli& c:\Inetpub\tpp-bin\xinteract -Ninteract.pep.xml -p0.05 -l7 -PPM -OAPE -dDECOY e161212_EC2_03.tandem.pep.xml * c:\Inetpub\tpp-bin\xinteract (TPP v4.8.0 PHILAE, Build 201411201551-6764 (mingw-i686)) PPM mode in Accurate Mass Model ... The syntax of the command is incorrect. command "mkdir -p C:/tmp/a20608" failed: Operation not permittedwarning: the webserver temporary directory C:/tmp/a20608 specified by WEBSERVER_TMP does not exist and could not be created. Tempfiles will created in data directories instead. running: "C:/Inetpub/tpp-bin/InteractParser "C:/tmp/a20608/interact.pep.xml" "e161212_EC2_03.tandem.pep.xml" -L"7"" file 1: e161212_EC2_03.tandem.pep.xml SUCCESS: CORRECTED data file c:/Inetpub/wwwroot/ISB/data/Ecoli/e161212_EC2_03.mzXML in msms_run_summary tag ... processed altogether 11459 results INFO: Results written to file: c:/tmp/a20608/interact.pep.xml command completed in 3 sec running: "C:/Inetpub/tpp-bin/DatabaseParser "C:/tmp/a20608/interact.pep.xml"" pipe "C:/Inetpub/tpp-bin/DatabaseParser "C:/tmp/a20608/interact.pep.xml"" failed: No errorerror, could not execute: C:/Inetpub/tpp-bin/DatabaseParser "C:/tmp/a20608/interact.pep.xml" -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
