Hi,
This is an old post but I am actually using TPP in Linux command lines with
Proteome Discoverer pep.xml exported search results and I also had the
"Segmentation fault" error and to solve that I have deleted the
search_summary tag on the pep.xml file.
Then I also had an other error during PeptideProphetParser ("NULL distri,
search engine=Sequest HT; command "PeptideProphetParser" exited with
non-zero exit code : 256 ; QUIT the job is incomplete").
And with the PeptideProphetParser source code I finally found the solution
: on the search_summary tag and search_engine option on the pep.xml file, I
have replaced "Sequest HT" by "SEQUEST" and it worked!
Marine.
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