I think I reached my goal. Just setting the startup module to start before 
startup. This way it is loaded before the filesystem plugin is loaded, and 
as a result added tiddlers are not saved to the FS. But as soon as you edit 
a tiddler it is then saved to the default tiddlers location. Since I can 
live with that because my main goal was to just search, is not what I want. 
Modifications to the "text" of the document should be saved to the "raw" 
document, and any other field should be saved to a metadata file or store 
that I have to decide where to save. I have to ideas about where to save 
the metadata:


   - A centralized store within my wiki folder
   - A hidden sub-folder in the same location were the file is. This has 
   the advantage of portability, and you can easily modify it by hand.


Another open question is: where should I take the "folders to index" from? 
Currently they are on a json tiddler. This has the advantage that it is 
very easy to modify from TW, but it is some way hidden to the user. Should 
I move to a json file? 

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