Irene, 

The "existing database" I am dealing with is Derby running on a desktop client 
and on a server. The database contains a conventional SQL data model for high 
frequency sensor data. I  would like to annotate the the sensor data using 
rdf/owl and store it in the same database as the sensor data. 

Arthur

Sent from my iPhone

On Aug 3, 2010, at 12:03 PM, "Irene Polikoff" <[email protected]> wrote:

> Hi Arthur,
> 
>  
> 
> Jena SDB over RDBMS is intended for users who have existing relational on a  
> server which they want to use as RDF storage. Users who don’t have this 
> requirement and just want to quickly create an RDF database could you use TDB.
> 
>  
> 
> From your perspective, what needs would be served by an embedded SQL database 
> which are already not met by TDB?
> 
>  
> 
> Regards,
> 
>  
> 
> Irene
> 
>  
> 
> From: [email protected] 
> [mailto:[email protected]] On Behalf Of Arthur Keen
> Sent: Monday, August 02, 2010 3:44 PM
> To: [email protected]
> Subject: Re: [topbraid-users] Re: MySQL Communications link failure
> 
>  
> 
> Thanks Scott,
> 
>  
> 
> I got used to using the TDB interface, and I was hoping TBCME would offer to 
> create the MySQL instance if it did not exist :)  Are there any plans to 
> support an embedded SQL database for Jena SDB, for example,  Derby?  
> 
>  
> 
> Arthur
> 
>  
> 
> On Mon, Aug 2, 2010 at 2:32 PM, Scott Henninger <[email protected]> 
> wrote:
> 
> Arthur; Yes, it is necessary to create a MySQL instance (schema) in
> MySQL before using SDB.
> 
> -- Scott
> 
> 
> On Aug 2, 2:15 pm, Arthur Keen <[email protected]> wrote:
> > I am using TBCME 3.3.2 on Mac OS-X 10..6.4 and would like to create a Jena
> > SDB mysql repository.  I downloaded mysql-connector-java-5.1.13.jar, renamed
> > it to mysql-connector.jar, and put it in the root of my workspace folder.
> >
> > Tried New>>RDF/OWL Jena SDB Database Connection.  TBCME throws an error
> > "Operation Failed.  Reason: could not create database"  and the "Details"
> > button shows "Communications link failure."   Restarting compose ad
> > refreshing the workspace before retrying resulted in the same error.  Is the
> > driver that I downloaded the right version?  Do I need to create a mysql
> > instance outside of topbraid?
> >
> > Regards
> >
> > Arthur
> >
> > Exception Trace Stack
> >
> > com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: Communications link
> > failure
> >
> > The last packet sent successfully to the server was 0 milliseconds ago. The
> > driver has not received any packets from the server.
> >
> > at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
> >
> > at
> > sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
> >
> > at
> > sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
> >
> > at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
> >
> > at com.mysql.jdbc.Util.handleNewInstance(Util.java:409)
> >
> > at com.mysql.jdbc.SQLError.createCommunicationsException(SQLError.java:1118)
> >
> > at com.mysql.jdbc.MysqlIO.<init>(MysqlIO.java:343)
> >
> > at com.mysql.jdbc.ConnectionImpl.connectOneTryOnly(ConnectionImpl.java:2308)
> >
> > at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2122)
> >
> > at com.mysql.jdbc.ConnectionImpl.<init>(ConnectionImpl.java:774)
> >
> > at com.mysql.jdbc.JDBC4Connection.<init>(JDBC4Connection.java:49)
> >
> > at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
> >
> > at
> > sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
> >
> > at
> > sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
> >
> > at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
> >
> > at com.mysql.jdbc.Util.handleNewInstance(Util.java:409)
> >
> > at com.mysql.jdbc.ConnectionImpl.getInstance(ConnectionImpl.java:375)
> >
> > at
> > com.mysql.jdbc.NonRegisteringDriver.connect(NonRegisteringDriver.java:289)
> >
> > at org.topbraid.javax.util.DBUtil.getConnection(DBUtil.java:51)
> >
> > at org.topbraid.sdb.module.StoreCache.createStore(StoreCache.java:50)
> >
> > at
> > org.topbraid.sdb.module.AbstractSDBModule.getStoreCache(AbstractSDBModule.java:55)
> >
> > at
> > org.topbraid.sdb.module.AbstractSDBModule.getStore(AbstractSDBModule.java:39)
> >
> > at
> > org.topbraid.sdb.module.exportToSDB.ExportToSDBModule.execute(ExportToSDBModule.java:67)
> >
> > at
> > org.topbraid.sparqlmotion.engine.impl.ExecutionEngine.execute(ExecutionEngine.java:212)
> >
> > at
> > org.topbraid.sparqlmotion.engine.impl.ExecutionEngine.executeModule(ExecutionEngine.java:186)
> >
> > at
> > org.topbraid.sparqlmotion.engine.impl.ExecutionEngine.execute(ExecutionEngine.java:155)
> >
> > at org.topbraidcomposer.sdb.wizards.SDBUtil.performFinish(SDBUtil.java:55)
> >
> > at
> > org.topbraidcomposer.sdb.wizards.create.SDBCreateWizard$1.run(SDBCreateWizard.java:65)
> >
> > at
> > org.eclipse.jface.operation.ModalContext$ModalContextThread.run(ModalContext.java:121)
> >
> > Caused by: java.net.ConnectException: Connection refused
> >
> > at java.net.PlainSocketImpl.socketConnect(Native Method)
> >
> > at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:333)
> >
> > at java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
> >
> > at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
> >
> > at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:432)
> >
> > at java.net.Socket.connect(Socket.java:529)
> >
> > at java.net.Socket.connect(Socket.java:478)
> >
> > at java.net.Socket.<init>(Socket.java:375)
> >
> > at java.net.Socket.<init>(Socket.java:218)
> >
> > at
> > com.mysql.jdbc.StandardSocketFactory.connect(StandardSocketFactory.java:256)
> >
> > at com.mysql.jdbc.MysqlIO.<init>(MysqlIO.java:292)
> 
> --
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