Hi: I am hosting PGA on EC2 instance and I currently cannot move data from EC2 to Stampede. On the contrary I can get data files from Stampede to EC2 instance.
Following is the error I am getting. org.apache.airavata.gfac.core.handler.GFacHandlerException: Error while input File Staging at org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:191) at org.apache.airavata.gfac.ssh.handler.SSHInputHandler.invoke(SSHInputHandler.java:105) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:895) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:686) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183) at org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: org.apache.airavata.gfac.core.handler.GFacHandlerException: Error while input File Staging at org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:183) ... 9 more Caused by: org.apache.airavata.gsi.ssh.api.SSHApiException: Failed during scping local file://[email protected]:/var/www/html/experimentData/rekepalli7b79a4a79919d9cd100656fadf897e89/testFasta to remote file stampede.tacc.xsede.org:rFile : /scratch/01437/ogce/usda-workdirs/mt_68c0b9ee-7ea9-4d5b-bff8-e151091a07c0/testFasta at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.scpTo(GSISSHAbstractCluster.java:470) at org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:177) ... 9 more Caused by: java.io.FileNotFoundException: /[email protected]:/var/www/html/experimentData/rekepalli7b79a4a79919d9cd100656fadf897e89/testFasta (No such file or directory) at java.io.FileInputStream.open0(Native Method) at java.io.FileInputStream.open(FileInputStream.java:195) at java.io.FileInputStream.(FileInputStream.java:138) at java.io.FileInputStream.(FileInputStream.java:93) at org.apache.airavata.gsi.ssh.util.SSHUtils.scpTo(SSHUtils.java:293) at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.scpTo(GSISSHAbstractCluster.java:463) ... 10 more org.apache.airavata.gfac.GFacException: Error Invoking Handlers:Error Executing a InFlow Handler org.apache.airavata.gfac.GFacException: Error launching the Job at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:505) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:183) at org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: org.apache.airavata.gfac.GFacException: Error Invoking Handlers:Error Executing a InFlow Handler at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:743) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:492) ... 5 more Caused by: org.apache.airavata.gfac.GFacException: Error Invoking Handlers:Error Executing a InFlow Handler at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:910) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:686) ... 6 more Caused by: org.apache.airavata.gfac.GFacException: Error Executing a InFlow Handler at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:899) ... 7 more Caused by: org.apache.airavata.gfac.core.handler.GFacHandlerException: Error while input File Staging at org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:191) at org.apache.airavata.gfac.ssh.handler.SSHInputHandler.invoke(SSHInputHandler.java:105) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:895) ... 7 more Caused by: org.apache.airavata.gfac.core.handler.GFacHandlerException: Error while input File Staging at org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:183) ... 9 more Caused by: org.apache.airavata.gsi.ssh.api.SSHApiException: Failed during scping local file://[email protected]:/var/www/html/experimentData/rekepalli7b79a4a79919d9cd100656fadf897e89/testFasta to remote file stampede.tacc.xsede.org:rFile : /scratch/01437/ogce/usda-workdirs/mt_68c0b9ee-7ea9-4d5b-bff8-e151091a07c0/testFasta at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.scpTo(GSISSHAbstractCluster.java:470) at org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:177) ... 9 more Caused by: java.io.FileNotFoundException: /[email protected]:/var/www/html/experimentData/rekepalli7b79a4a79919d9cd100656fadf897e89/testFasta (No such file or directory) at java.io.FileInputStream.open0(Native Method) at java.io.FileInputStream.open(FileInputStream.java:195) at java.io.FileInputStream.(FileInputStream.java:138) at java.io.FileInputStream.(FileInputStream.java:93) at org.apache.airavata.gsi.ssh.util.SSHUtils.scpTo(SSHUtils.java:293) at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.scpTo(GSISSHAbstractCluster.java:463) ... 10 more
