That process also gives creating job descriptor error as following, [ERROR] expId: testtest12_37cc9f7b-d3e4-48cc-aa5a-032401485cd9, processId: PROCESS_52bb3e9f-1cdf-405e-bf2b-dce00369f478, taskId: TASK_0762e150-08e0-4576-819f-85a95e3a5a4a type: JOB_SUBMISSION,:- Job submission task failed, reason: Error occurred while creating job descriptor
I put 'sbatch' for SUBMISSON, 'squeue' for JOB_MONITORING, and scancel for 'DELETION' at Job Submission Interfaces section Thank you, Heejoon. On Fri, Oct 30, 2015 at 9:53 AM, Heejoon Chae <[email protected]> wrote: > Hi, > > I have succeeded to submit test 'echo' job through PGA's Slurm sbatch > interface running both on locally installed PGA and Airavata server. > > Now I can see that the job is correctly queued and the echo script > successfully generates result. > > However, on the Airavata server side, I got several errors related with > 'Data type '<UNKNOWN>' is not supported' and eventually got '[ERROR] Error > while getting experiment info' > > Following is part of errors related with the data type ''<UNKNOWN>'. > > > **************************************************************************************************** > [ERROR] Error occurred while creating job descriptor > org.apache.airavata.gfac.core.GFacException: Error persisting job > statusError while adding JOB_STATUS > at > org.apache.airavata.gfac.core.GFacUtils.saveJobStatus(GFacUtils.java:262) > at > org.apache.airavata.gfac.impl.task.SSHJobSubmissionTask.execute(SSHJobSubmissionTask.java:91) > at > org.apache.airavata.gfac.impl.GFacEngineImpl.executeTask(GFacEngineImpl.java:522) > at > org.apache.airavata.gfac.impl.GFacEngineImpl.executeJobSubmission(GFacEngineImpl.java:207) > at > org.apache.airavata.gfac.impl.GFacEngineImpl.executeProcess(GFacEngineImpl.java:180) > at > org.apache.airavata.gfac.impl.GFacWorker.executeProcess(GFacWorker.java:188) > at org.apache.airavata.gfac.impl.GFacWorker.run(GFacWorker.java:95) > at > java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) > at > java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) > at java.lang.Thread.run(Thread.java:745) > Caused by: org.apache.airavata.registry.cpi.RegistryException: Error while > adding JOB_STATUS > at > org.apache.airavata.registry.core.experiment.catalog.impl.ExperimentCatalogImpl.add(ExperimentCatalogImpl.java:189) > at > org.apache.airavata.gfac.core.GFacUtils.saveJobStatus(GFacUtils.java:251) > ... 9 more > Caused by: org.apache.airavata.registry.cpi.RegistryException: > org.apache.airavata.registry.cpi.RegistryException: > <openjpa-2.2.0-r422266:1244990 fatal general error> > org.apache.openjpa.persistence.PersistenceException: dataType '<UNKNOWN>' > is not supported. > at > org.apache.airavata.registry.core.experiment.catalog.impl.ExperimentRegistry.addJobStatus(ExperimentRegistry.java:557) > at > org.apache.airavata.registry.core.experiment.catalog.impl.ExperimentCatalogImpl.add(ExperimentCatalogImpl.java:182) > ... 10 more > > ******************************************************************************************************** > > Any suggestions? > > Thank you, > Heejoon. >
