Hi Ros, hmm ... I remember putting this error message there myself at some point. This typically happens if you atts/filters in your exp/imp are mismatched with the actual atts/filters they are pointing to so you would have to check if this exp/importable works both ways. Just out of curiousity ... would it not be simpler to use Ensembl ids? I believe Reactome has those ...
a On Fri, Oct 21, 2011 at 10:30 AM, Rosalind Cutts <[email protected]>wrote: > Arek > > The link is on uniprot/swissprot id > > I get the error : > Serious Error: returning undef ... missing attributes for your exportable? > > > Ros > ------------------------------ > *From:* Arek Kasprzyk [[email protected]] > *Sent:* 21 October 2011 15:11 > *To:* Rosalind Cutts > *Cc:* [email protected] > *Subject:* Re: [BioMart Users] Biomart dataset links > > Hi Ros, > could you elaborate on what you mean by 'not the other way round'? Are you > getting no results or different resutls? what is the link on? It will be > easier to diagnose the problem > > cheers, > a > > On Fri, Oct 21, 2011 at 8:05 AM, Rosalind Cutts <[email protected]>wrote: > >> Hi >> >> I have a link from my biomart 0.7 databases to reactome pathways biomart >> and I've noticed it works fine if the Reactome dataset is selected first but >> not the other way around. The other reactome datasets seem to work fine. >> Any pointers as to why this might be. >> >> Thanks >> >> Ros >> >> Ros Cutts >> Bioinformatics >> Barts Cancer Institute >> QMUL >> >> >> >> >> >> >> >> >> >> This email may contain information that is privileged, confidential or >> otherwise protected from disclosure. >> It must not be used by, or its contents copied or disclosed to, persons >> other than the addressee. >> If you have received this email in error please notify the sender >> immediately and delete the email. >> This message has been scanned for viruses. >> >> >> _______________________________________________ >> Users mailing list >> [email protected] >> https://lists.biomart.org/mailman/listinfo/users >> >> >
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