Hi Ros, I am glad I could help :) a
On Mon, Oct 24, 2011 at 4:45 AM, Rosalind Cutts <[email protected]>wrote: > Thanks Arek, > > Deleting the links & using ensembl ids works much better. > > Ros > > > > On 21/10/2011 18:10, "Arek Kasprzyk" <[email protected]> wrote: > > Hi Ros, > hmm ... I remember putting this error message there myself at some point. > This typically happens if you atts/filters in your exp/imp are mismatched > with the actual atts/filters they are pointing to so you would have to check > if this exp/importable works both ways. Just out of curiousity ... would it > not be simpler to use Ensembl ids? I believe Reactome has those ... > > a > > > > On Fri, Oct 21, 2011 at 10:30 AM, Rosalind Cutts <[email protected]> > wrote: > > Arek > > The link is on uniprot/swissprot id > > I get the error : > Serious Error: returning undef ... missing attributes for your exportable? > > > Ros > ------------------------------ > *From:* Arek Kasprzyk [[email protected]] > *Sent:* 21 October 2011 15:11 > *To:* Rosalind Cutts > *Cc:* [email protected] > *Subject:* Re: [BioMart Users] Biomart dataset links > > Hi Ros, > could you elaborate on what you mean by 'not the other way round'? Are you > getting no results or different resutls? what is the link on? It will be > easier to diagnose the problem > > cheers, > a > > On Fri, Oct 21, 2011 at 8:05 AM, Rosalind Cutts <[email protected]> > wrote: > > Hi > > I have a link from my biomart 0.7 databases to reactome pathways biomart > and I've noticed it works fine if the Reactome dataset is selected first but > not the other way around. The other reactome datasets seem to work fine. > Any pointers as to why this might be. > > Thanks > > Ros > > Ros Cutts > Bioinformatics > Barts Cancer Institute > QMUL > > > > > This email may contain information that is privileged, confidential or > otherwise protected from disclosure. > It must not be used by, or its contents copied or disclosed to, persons > other than the addressee. > If you have received this email in error please notify the sender > immediately and delete the email. > This message has been scanned for viruses. > > > _______________________________________________ > Users mailing list > [email protected] > https://lists.biomart.org/mailman/listinfo/users > > > > >
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