Thanks Arek, Deleting the links & using ensembl ids works much better.
Ros On 21/10/2011 18:10, "Arek Kasprzyk" <[email protected]> wrote: Hi Ros, hmm ... I remember putting this error message there myself at some point. This typically happens if you atts/filters in your exp/imp are mismatched with the actual atts/filters they are pointing to so you would have to check if this exp/importable works both ways. Just out of curiousity ... would it not be simpler to use Ensembl ids? I believe Reactome has those ... a On Fri, Oct 21, 2011 at 10:30 AM, Rosalind Cutts <[email protected]> wrote: Arek The link is on uniprot/swissprot id I get the error : Serious Error: returning undef ... missing attributes for your exportable? Ros ________________________________ From: Arek Kasprzyk [[email protected]] Sent: 21 October 2011 15:11 To: Rosalind Cutts Cc: [email protected] Subject: Re: [BioMart Users] Biomart dataset links Hi Ros, could you elaborate on what you mean by 'not the other way round'? Are you getting no results or different resutls? what is the link on? It will be easier to diagnose the problem cheers, a On Fri, Oct 21, 2011 at 8:05 AM, Rosalind Cutts <[email protected]> wrote: Hi I have a link from my biomart 0.7 databases to reactome pathways biomart and I've noticed it works fine if the Reactome dataset is selected first but not the other way around. The other reactome datasets seem to work fine. Any pointers as to why this might be. Thanks Ros Ros Cutts Bioinformatics Barts Cancer Institute QMUL This email may contain information that is privileged, confidential or otherwise protected from disclosure. It must not be used by, or its contents copied or disclosed to, persons other than the addressee. If you have received this email in error please notify the sender immediately and delete the email. This message has been scanned for viruses. _______________________________________________ Users mailing list [email protected] https://lists.biomart.org/mailman/listinfo/users
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