Hello everyone, I am an early PhD students in bioninformatics, and wish to integrate gene expression microarray data that my group has generated into the BioMart context. (We've mapped the probes to the Entrez & EnsEMBL genes IDs)
As per a previous email yesterday, I tried installing BioMart on the current small server of the lab. The installation was successful, but I get a timeout error every time try to start the quick start example in the manual. (which is missing some details about troubleshooting, to my taste). The server runs on Debian 5.0.9, quite outdated since even the apt-get command isn't able to read headers... I got an blank PC to try and set up a new server, and now I'm turning to you, dear community, to advise me with a configuration proven to be compatible, and run smoothly a BioMart instance. Could anyone suggest such a configuration (OS)? Thanks in advance, Kévin -- Kévin RUE-ALBRECHT Computational Infection Biology PhD Programme University College Dublin Ireland http://fr.linkedin.com/pub/k%C3%A9vin-rue/28/a45/149/en
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