http://www.biomart.org/biomart/martservice?type=datasets&mart=ensembl
On 23 January 2013 17:44, Muhammad Javed <[email protected]> wrote: > Hi, > I am using XML queries as given below (as a sample) for extracting the .bin > files for specific organisms. > I am able to create xml queries only for three organisms i.e., hsapieans, > mmusculus and rnorvegicus. > > <?xml version="1.0" encoding="UTF-8"?> > <!DOCTYPE Query> > <Query virtualSchemaName = "default" formatter = "TSV" header = "0" > uniqueRows = "0" count = "" datasetConfigVersion = "0.6" > > <Dataset name = "hsapiens_gene_ensembl" interface = "default" > > <Attribute name = "ensembl_gene_id" /> > <Attribute name = "ensembl_transcript_id" /> > <Attribute name = "entrezgene" /> > </Dataset> > </Query> > > If i see the queries, mainly they are different from each other on dataset > name XYZ_gene_ensembl > > I wanted to gather data for other organisms too. I was wondering how can I > do that. > Is there any list of dataset names which I could use and create separate xml > query files for each organism or such xml queries are available on your web? > > Thanks in advance for your help. > > Regards > M. Javed > > > > > > > > -- > Kind regards > MJ > > Muhammad Javed, Research Associate, Department of Computer Science, Wayne > State University, Detroit, 5057 Woodward Avenue, Suit 3010, > MI 48202 > > _______________________________________________ > Users mailing list > [email protected] > https://lists.biomart.org/mailman/listinfo/users > _______________________________________________ Users mailing list [email protected] https://lists.biomart.org/mailman/listinfo/users
