try to total disable SELinux or see this threads http://copilotco.com/mail-archives/fedora-selinux.2007/msg00752.html
On 4/13/2011 7:19 PM, Casimir Wierzynski wrote:
Hi - SELinux is now permissive on all machines but this makes no difference. COn Wed, Apr 13, 2011 at 4:02 PM, "Hung-Sheng Tsao (Lao Tsao 老曹) Ph. D." <[email protected] <mailto:[email protected]>> wrote:hi is SELinux on or off? if it is on try to set it off regards On 4/13/2011 6:44 PM, Casimir Wierzynski wrote:Hi Rayson - We are using Grid Engine ge6.2u5. We are using the built-in interactive support. Thanks -C On Wed, Apr 13, 2011 at 11:35 AM, Rayson Ho <[email protected] <mailto:[email protected]>> wrote: Hi, Which version of Grid Engine (or Open Grid Scheduler?) are you using?? And is it built-in interactive job support, or you've configured the ssh integration?? Rayson On Wed, Apr 13, 2011 at 2:31 PM, Casimir Wierzynski <[email protected] <mailto:[email protected]>> wrote: > Hi Rayon - Thanks for your reply. I read the page you sent and didn't find a > matching set of symptoms. > When I run qrsh -verbose hostname, I get > [cas@ca1-4 ~]$ qrsh -verbose hostname > Your job 10407 ("hostname") has been submitted > waiting for interactive job to be scheduled ... > Your interactive job 10407 has been successfully scheduled. > As I watch qstat -f, I see the hostname command running on one of the nodes. > But no output from the hostname command (or /bin/hostname). > Hope this helps, > Cas > > On Wed, Apr 13, 2011 at 11:12 AM, Rayson Ho <[email protected] <mailto:[email protected]>> wrote: >> >> Try "qrsh -verbose hostname" -- see if it prints any debug messages? >> >> http://gridscheduler.sourceforge.net/howto/commonproblems.html#interactive >> >> Rayson >> >> >> On Wed, Apr 13, 2011 at 2:07 PM, Casimir Wierzynski <[email protected] <mailto:[email protected]>> >> wrote: >> > Dear Grid Engine community, >> > We recently upgraded from RHEL4 to RHEL 6 on all of our grid machines >> > and >> > qmake isn't working any more. >> > I think I've narrowed the problem down to the fact that qrsh doesn't >> > work, >> > although qsub does. >> > When I run qmake, it exits without ever scheduling any of the dependent >> > jobs. If I try to run one of the dependent jobs via qrsh, the job starts >> > up >> > briefly on one of the machines but then quickly exits without >> > completion. If >> > I submit the same thing via qsub, it works file. >> > Here is a minimal example I've put together: >> > === test.make === >> > .PHONY : all >> > >> > >> > >> > all : >> > >> > /ghome/cas/test.sh >> > >> > >> > === test.sh === >> > /bin/hostname >> /ghome/samba/cas/out >> > ============ >> > Here are the commands I run: >> > [cas@ca1-4 ~]$ qmake -cwd -v PATH -- -j 999 -f /ghome/cas/test.sh >> > qmake: *** cannot determine architecture from environment variable >> > SGE_ARCH >> > no default architecture set >> > (qmake starts on a machine and then exits without running test.sh) >> > [cas@ca1-4 ~]$ qrsh /ghome/cas/test.sh >> > (test.sh runs on one of the machine and exits without creating output >> > file) >> > [cas@ca1-4 ~]$ qsub test.sh >> > Your job 10398 ("test.sh") has been submitted >> > (works fine) >> > I am puzzled, but I am also relatively new to SGE so I apologize if I am >> > doing something silly. >> > Cas >> > >> > >> > _______________________________________________ >> > users mailing list >> > [email protected] <mailto:[email protected]> >> > https://gridengine.org/mailman/listinfo/users >> > >> > >> > > _______________________________________________ users mailing list [email protected] <mailto:[email protected]> https://gridengine.org/mailman/listinfo/users_______________________________________________ users mailing list [email protected] <mailto:[email protected]> https://gridengine.org/mailman/listinfo/users
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