William- How many jobs does your scheduler allow to run at once per user?
qconf -ssconf (look for maxujobs) I've had users schedule task arrays with 40K tasks, but we set maxujobs to between 100-200, and that's as many as will run at once. Mark ________________________________________ From: [email protected] [[email protected]] On Behalf Of Hung-ShengTsao (Lao Tsao) Ph.D. [[email protected]] Sent: Tuesday, May 17, 2011 10:21 AM To: William Hay Cc: [email protected] Subject: Re: [gridengine users] qstat -s p +qstat -r <> qstat -s rp how many total slots in your cluster for 5000 tasks? On 5/17/2011 10:19 AM, William Hay wrote: > On 17 May 2011 15:06, Hung-ShengTsao (Lao Tsao) Ph.D.<[email protected]> > wrote: >> I just check in a test cluster >> qsub -t 1-10 simple.sh >> qstat -s p -u<uid> does show qw stat with the ja-task ID changing >> qstat -s r -u uid show running job >> which version of ge your are running >> I use ge6.2u5 in r5.4 >> regards >> > 6.2u3 (we should upgrade). We also have array jobs from other jobs > where both running and queued tasks show up. > > William >> >> >> On 5/17/2011 9:51 AM, William Hay wrote: >>> One of our users has submitted an array job of about 5000 tasks. >>> >>> Some of these tasks are running. Some are not. If I run qstat -s rp >>> -u<username> then I see tasks in both states "r" or state "qw". >>> Running qstat -s r -u<username> shows the running tasks. However >>> running qstat -s p -u<username> does not show the tasks in state qw. >>> >>> These waiting tasks had previously been in an error state caused by a >>> problem with our cluster file system but I cleared the error once we >>> had fixed >>> the problem. Any idea what is going on and whether these tasks will >>> eventually run. >>> >>> William >>> _______________________________________________ >>> users mailing list >>> [email protected] >>> https://gridengine.org/mailman/listinfo/users _______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users
