did you check that the userid of these jobs showup in qstat -s rp in qw may be after you rescured form Eqw userid changed JAT
On 5/18/2011 5:40 AM, William Hay wrote:
On 18 May 2011 10:08, Reuti<[email protected]> wrote:Am 18.05.2011 um 10:57 schrieb William Hay:On 17 May 2011 16:09, Reuti<[email protected]> wrote:Am 17.05.2011 um 15:51 schrieb William Hay:One of our users has submitted an array job of about 5000 tasks. Some of these tasks are running. Some are not. If I run qstat -s rp -u<username> then I see tasks in both states "r" or state "qw". Running qstat -s r -u<username> shows the running tasks. However running qstat -s p -u<username> does not show the tasks in state qw.Correct, there is the option:If this is the "correct behavior" then I have lots of other array jobs that are showing up incorrectly.$ qstat -s p -g d -u<username> to list each task on one line on its own.I'm not looking for each task on its own. I do think there should be a single line combining all the queued tasks when I do qstat -s p.So you want to have an output like: reuti@pc15370:~> qstat -s p job-ID prior name user state submit/start at queue slots ja-task-ID ----------------------------------------------------------------------------------------------------------------- 467 0.00000 test.sh reuti qw 05/18/2011 11:01:51 1 17-10000:1 ?Yup that's what I expect to see and don't.It's just the way it's implemented right now. Can you provide examples?Then why do the waiting tasks show up in qstat -s p for other part running/part queued array jobs? Although these tasks have been rescued from an Eqw state I would still expect them to show up.-- ReutiThe same as qstat -s rp. The same as all the other array jobs that are part queued and part tunning. Essentially I think these two command lines should produce the same output and they don't: (qstat -s r -u '*'|tail -n +3);(qstat -s p -u '*'|tail -n +3 ) qstat -s rp -u '*'|tail -n +3 The line aggregating all the queued tasks only shows up when I use a single qstat with -s rp. Other array jobs do show the queued tasks line when I use qstat -s p The tail -n +3 is just to chop off the headers.-- ReutiThese waiting tasks had previously been in an error state caused by a problem with our cluster file system but I cleared the error once we had fixed the problem. Any idea what is going on and whether these tasks will eventually run. William _______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users_______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users
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