Hi, > Am 05.12.2018 um 19:10 schrieb Dimar Jaime González Soto > <dimar.gonzalez.s...@gmail.com>: > > Hi everyone I'm trying to run OMA standalone on a grid engine setup with this > line:
I assume OMA is the name of your application. Do you have any link to its website? > > qsub -v NR_PROCESSES=60 -b y -j y -t 1-60 -cwd /usr/local/OMA/bin/OMA > > it works but only execute 4 processes per node, there are 4 nodes with 16 > logical threads. My main.q configuration is: > > qname main.q > hostlist @allhosts > seq_no 0 > load_thresholds np_load_avg=1.75 > suspend_thresholds NONE > nsuspend 1 > suspend_interval 00:05:00 > priority 0 > min_cpu_interval 00:05:00 > processors UNDIFINED > qtype BATCH INTERACTIVE > ckpt_list NONE > pe_list make > rerun FALSE > slots 16 > tmpdir /tmp > shell /bin/csh > prolog NONE > epilog NONE > shell_start_mode posix_compliant > starter_method NONE > suspend_method NONE > resume_method NONE > terminate_method NONE > notify 00:00:60 > owner_list NONE > user_lists NONE > xuser_lists NONE > subordinate_list NONE > complex_values NONE > projects NONE > xprojects NONE > calendar NONE > initial_state default > s_rt INFINITY > h_rt INFINITY > s_cpu INFINITY > h_cpu INFINITY > s_fsize INFINITY > > I want to run 60 processes at the same time, any advice? Did you define any Parallel Environment for the application? There are none specified in your submission command or the queue configuration. Does the application support to run across nodes by MPI or other means for the communication? The PE would deliver a hostlist to the application, which then can be used to start processes on other nodes too. Some MPI libraries even discover BTW: as you wrote "16 logical threads": often its advisable for HPC to disable Hyperthreading and use only the physically available cores. -- Reuti > -- > Atte. > > Dimar González Soto > Ingeniero Civil en Informática > Universidad Austral de Chile > > > _______________________________________________ > users mailing list > users@gridengine.org > https://gridengine.org/mailman/listinfo/users _______________________________________________ users mailing list users@gridengine.org https://gridengine.org/mailman/listinfo/users
