Dear Gilles,
Thank you very much for your reply!
Gilles Gouaillardet <gilles.gouaillar...@gmail.com> escribió:
Jorge,
The logs suggest you built on a Fedora 39 with a custom built gcc.
I almost agree (that is, it is a custom built of gcc). Last night I
also noticed
that the messages suggested I had Fedora 39 but, on the other hand,
since I routinely update to the latest versions, without any
difficulties of any
kind, I am almost certain that is not the case. So now I am surprised by the
discrepancy with what is being reported, on the same laptop, for example.
$ cat /etc/fedora-release
Fedora release 42 (Adams)
$ uname -r
6.5.6-300.fc39.x86_64
$ cat /etc/os-release
NAME="Fedora Linux"
VERSION="42 (Workstation Edition)"
RELEASE_TYPE=stable
ID=fedora
VERSION_ID=42
VERSION_CODENAME=""
PLATFORM_ID="platform:f42"
PRETTY_NAME="Fedora Linux 42 (Workstation Edition)"
ANSI_COLOR="0;38;2;60;110;180"
LOGO=fedora-logo-icon
CPE_NAME="cpe:/o:fedoraproject:fedora:42"
DEFAULT_HOSTNAME="fedora"
HOME_URL="https://fedoraproject.org/";
DOCUMENTATION_URL="https://docs.fedoraproject.org/en-US/fedora/f42/system-administrators-guide/";
SUPPORT_URL="https://ask.fedoraproject.org/";
BUG_REPORT_URL="https://bugzilla.redhat.com/";
REDHAT_BUGZILLA_PRODUCT="Fedora"
REDHAT_BUGZILLA_PRODUCT_VERSION=42
REDHAT_SUPPORT_PRODUCT="Fedora"
REDHAT_SUPPORT_PRODUCT_VERSION=42
SUPPORT_END=2026-05-13
VARIANT="Workstation Edition"
VARIANT_ID=workstation
Perhaps it would be more advisable to reinstall Fedora 42 from scratch?
You might have more luck using the distro compiler, also, using the distro
provided hwloc and libevent libraries will make things easier.
Ok. I will also keep this suggestion in mind.
Cheers,
Gilles
Best regards.
Jorge D'Elia.
---
On Tue, Jul 29, 2025 at 9:51 AM <jde...@intec.unl.edu.ar> wrote:
Hi there,
Today I tried to update the openmpi package by building
https://download.open-mpi.org/release/open-mpi/v5.0/openmpi-5.0.8.tar.gz
on a x86_64-pc-linux-gnu machine:
$ cat /proc/cpuinfo
processor : 0
vendor_id : GenuineIntel
cpu family : 6
model : 60
model name : Intel(R) Core(TM) i7-4702MQ CPU @ 2.20GHz
stepping : 3
microcode : 0x28
cpu MHz : 798.197
cache size : 6144 KB
physical id : 0
siblings : 4
core id : 0
cpu cores : 4
apicid : 0
initial apicid : 0
fpu : yes
fpu_exception : yes
cpuid level : 13
wp : yes
using a Fedora 42 release:
$ uname --a
Linux pitonisa 6.5.6-300.fc39.x86_64 #1 SMP PREEMPT_DYNAMIC Fri Oct 6
19:57:21 UTC 2023 x86_64 GNU/Linux
However, this time, there is the following error:
...
CC pevent.o
CCLD pevent
/usr/bin/ld:
/home/bigpack/openmpi-paq/openmpi-5.0.8/BUILD/3rd-party/libevent-2.1.12-stable-ompi/.libs/libevent_pthreads.so:
undefined reference to `__pthread_cond_timedwait64'
collect2: error: ld returned 1 exit status
make[4]: *** [Makefile:711: pevent] Error 1
make[4]: Leaving directory
'/home/bigpack/openmpi-paq/openmpi-5.0.8/BUILD/3rd-party/openpmix/src/tools/pevent'
make[3]: *** [Makefile:1291: all-recursive] Error 1
make[3]: Leaving directory
'/home/bigpack/openmpi-paq/openmpi-5.0.8/BUILD/3rd-party/openpmix/src'
make[2]: *** [Makefile:789: all-recursive] Error 1
make[2]: Leaving directory
'/home/bigpack/openmpi-paq/openmpi-5.0.8/BUILD/3rd-party/openpmix'
make[1]: *** [Makefile:1412: all-recursive] Error 1
make[1]: Leaving directory
'/home/bigpack/openmpi-paq/openmpi-5.0.8/BUILD/3rd-party'
make: *** [Makefile:1540: all-recursive] Error 1
(see the 3 attached files).
Please, any clue to solve it?
Thanks in advance.
Regards.
Jorge D'Elia.
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