So your workflow was:

- run engine-setup and got failure
was it able in your case to restore the engine db in this first run and start engine again? You wrote that there was an upload failure and that you removed it: did you mean you removed it from the GUI, and confirming that after first failure the webadmin gui was still reachable?

No, WUI was down because service was stopped by engine-setup and not started afterwards when restore of DB backups failed. But starting ovirt-engine service brought engine and WUI up.

In my case after first run failure, my engine is down and trying to reach I get:
Service Unavailable

The server is temporarily unable to service your request due to maintenance downtime or capacity problems. Please try again later.

- run engine-setup again and got failure
It seems that after this second failure your engine and dwh db are down, so also the engine portal...
Then you manually execute the delete statement

- engine-setup again and it succeeds


Yes, just inspected the table, deleted one row with the mentioned stament and sucessfully retried the upgrade.


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