Luca: I have added the script to the lib/vmtk/vmtk directory. I tried to run the vmtksurfaceclipper using pypepad with two surfaces. I'm not sure if my syntax in Pypepad is wrong, or if there is some greater problems that I have from adding the python script to my lib/vmtk/vmtk directory. Below is the script that I used in Pypepad to try and run the code:
vmtkrenderer --pipe vmtksurfaceclipper -ifile Inputfile1.vtp -ofile OutputFile1.vtp --pipe vmtksurfaceclipper -transform @.otransform -ifile /InputFile2.vtp -ofile /OutputFile2.vtp Is this the correct syntax for using this script for multiple models that I want to clip with the same clipping widget? Thanks, Ben ________________________________________ From: Luca Antiga [luca.ant...@orobix.com] Sent: Wednesday, January 11, 2012 2:41 AM To: Dickerhoff, Benjamin R Cc: vmtk-users@lists.sourceforge.net Subject: Re: [vmtk-users] Using vmtksurfaceclipper for multiple surface models Hi Ben, in your case just take the script and copy it to the lib/vmtk/vmtk directory in your vmtk installation, it should work out of the box. Let me know Luca On Jan 9, 2012, at 9:27 PM, Dickerhoff, Benjamin R wrote: > Luca: > > I'm not exactly sure how this is done. Do we need to re-build VMTK, and > subsequently ITK and VTK? Or, is this as simple as copying the python script > into the vmtk library? > > I will need instructions for both how to build vmtk and how to incorporate > the new script into my vmtk installation. > > Thanks for your time, > Ben > ________________________________________ > From: Luca Antiga [luca.ant...@orobix.com] > Sent: Tuesday, December 20, 2011 7:38 AM > To: Dickerhoff, Benjamin R > Cc: vmtk-users@lists.sourceforge.net > Subject: Re: [vmtk-users] Using vmtksurfaceclipper for multiple surface models > > Dear Ben, > there is currently no way of passing the widget transform between scripts. > Where, there wasn't until a few minutes ago, because I just implemented it. > Here is the commit: > https://github.com/lantiga/vmtk/commit/5edebc75429110189eeb4b31c3387156be82825b > > and here is the new file > > https://github.com/lantiga/vmtk/blob/5edebc75429110189eeb4b31c3387156be82825b/vmtkScripts/vmtksurfaceclipper.py > > Let me know if you need instructions on how to build vmtk or simply > incorporate the new script in your vmtk installation. > > Best regards > > > Luca > > > On Dec 16, 2011, at 1:07 AM, Dickerhoff, Benjamin R wrote: > >> I am using vmtksurfaceclipper to isolate an aneurysm from its parent vessel. >> Is there a way to use the same cutting plane for two separate surface files? >> For example, I want to look at aneurysm morphology over a period of time. If >> I have surface models for two time points of the same aneurysm, where the >> second one has been registered to the first surface model, can I use >> vmtksurfaceclipper to isolate the first aneurysm from its parent vessel and >> then apply that exact same cutting plane to isolate the aneurysm in the >> second surface model? I appreciate any help/ advice you might be able to >> offer in working around this issue. >> >> Thanks, >> Ben Dickerhoff >> ------------------------------------------------------------------------------ >> Learn Windows Azure Live! Tuesday, Dec 13, 2011 >> Microsoft is holding a special Learn Windows Azure training event for >> developers. It will provide a great way to learn Windows Azure and what it >> provides. You can attend the event by watching it streamed LIVE online. >> Learn more at http://p.sf.net/sfu/ms-windowsazure >> _______________________________________________ >> vmtk-users mailing list >> vmtk-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/vmtk-users > > > ------------------------------------------------------------------------------ > Ridiculously easy VDI. With Citrix VDI-in-a-Box, you don't need a complex > infrastructure or vast IT resources to deliver seamless, secure access to > virtual desktops. With this all-in-one solution, easily deploy virtual > desktops for less than the cost of PCs and save 60% on VDI infrastructure > costs. Try it free! http://p.sf.net/sfu/Citrix-VDIinabox > _______________________________________________ > vmtk-users mailing list > vmtk-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/vmtk-users ------------------------------------------------------------------------------ Ridiculously easy VDI. With Citrix VDI-in-a-Box, you don't need a complex infrastructure or vast IT resources to deliver seamless, secure access to virtual desktops. With this all-in-one solution, easily deploy virtual desktops for less than the cost of PCs and save 60% on VDI infrastructure costs. Try it free! http://p.sf.net/sfu/Citrix-VDIinabox _______________________________________________ vmtk-users mailing list vmtk-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/vmtk-users
