On Fri, Sep 7, 2018 at 11:03 AM 'Andrey Brukhno' via votca <[email protected]> wrote: > > Hello, > > Upon a successful installation of the VOTCA's development (master) branch I > get this error: > > ~/votca-dev/bin/csg_map > /home/andrey/votca-dev/bin/csg_map: error while loading shared libraries: > libvotca_csg.so.5: cannot open shared object file: No such file or directory That just means you have to source VOTCARC.bash
We also recently added the option to inject an rpath on Linux, i.e. -DENABLE_RPATH_INJECT=ON, then the location of libvotca_csg.so.5 will be stored in csg_map itself. > > I tried to reinstall libhdf5-dev twice, also checked for all the other > dependencies, everything looks fine, yet the error. Not sure how this related to libhdf5, the above error refers to libvotca_csg.so.5, right? > > Meanwhile the 'stable' branch (1.4.1 apparently) did install correctly and > appears to work. > > Would appreciate any clues or a fix. > > Thanks > Andrey > > PS: for reference, below is the output messages from cmake for my attempted > installation of 'master' > > build > cmake -DBUILD_CSGAPPS=ON -DBUILD_TOOLS=ON -DWITH_GMX=ON > -DWITH_SQLITE3=OFF -DCMAKE_INSTALL_PREFIX=$HOME/votca-dev .. And yeah there is no BUILD_TOOLS option. > -- Boost version: 1.58.0 > -- Found the following Boost libraries: > -- program_options > -- filesystem > -- system > -- Intel(R) MKL could not be found. > -- Boost version: 1.58.0 > -- Found the following Boost libraries: > -- program_options > -- filesystem > -- system > -- Intel(R) MKL could not be found. > -- Checking for module 'libgromacs_d' > -- No package 'libgromacs_d' found > -- Could NOT find GMX (missing: GMX_EXECUTABLE) > -- Boost version: 1.58.0 > -- Found the following Boost libraries: > -- program_options > -- Intel(R) MKL could not be found. > -- Could NOT find CLANG_FORMAT (missing: CLANG_FORMAT_EXECUTABLE) > -- > -- The following OPTIONAL packages have been found: > > * Git > * FFTW3 > * EXPAT > * TXT2TAGS > * UnixCommands > * HDF5 > * Eigen3 > * PkgConfig > * Doxygen > > -- The following REQUIRED packages have been found: > > * Threads > * GROMACS (required version >= 20160000) > * Boost (required version >= 1.57.0) > * EIGEN3 (required version >= 3.3.0) > * VOTCA_TOOLS > * VOTCA_CSG > > -- The following OPTIONAL packages have not been found: > > * MKL > > -- Configuring done > -- Generating done > CMake Warning: > Manually-specified variables were not used by the project: > > BUILD_TOOLS > > > -- Build files have been written to: > /home/andrey/Progs/votca-dev/votca-1.5-master/build > > [bg:0](st:0) andrey@AndysHome: build > make > ... > > -- > You received this message because you are subscribed to the Google Groups > "votca" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at https://groups.google.com/group/votca. > For more options, visit https://groups.google.com/d/optout. -- Christoph Junghans Web: http://www.compphys.de -- You received this message because you are subscribed to the Google Groups "votca" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/votca. For more options, visit https://groups.google.com/d/optout.
