I rebuilt with this:
    77       call 
getopt('hs:e:a:b:r:m:p:d:f:w:t:964qTL:S:H:c:G:x:g:X:',long_options,c,   &    78 
           optarg,arglen,stat,offset,remain,.true.)    79       if (stat .ne. 
0) then    80          exit    81       end if    82       
shared_data%params%naggressive=0    83       shared_data%params%n2pass=2    84  
     shared_data%params%nranera=6    85       select case (c)

https://www.dropbox.com/s/6dw3boazh529lto/170215_1901.wav?dl=1
jt9.exe -L 100 -S 2500 -6 -9 -d 3 \Users\Black\Dropbox\170215_1901.wav
1901 -10 -0.4 1387 #  PY4SM CP6UA -15
<DecodeFinished>   0   1
WSJT-X r7562 shows this running the same file


de Mike W9MDB
      From: Joe Taylor <[email protected]>
 To: WSJT software development <[email protected]> 
 Sent: Wednesday, February 15, 2017 12:20 PM
 Subject: Re: [wsjt-devel] How to test decoding
   
Hi Mike,

Some parameters that are user-configurable in WSJT-X are hard-wired when 
you run jt9[.exe] from the command line.

Try making changes as follows, starting around line 81 in jt9.f90, and 
then re-compiling:

      shared_data%params%naggressive=0
      shared_data%params%n2pass=2
      shared_data%params%nranera=6

With these parameters set to the same values as those I've selected in 
WSJT-X, I get identical decoding results on a test file with 13 JT65 and 
10 JT9 signals, using the following command:

jt9 -L 100 -S 2500 -6 -9 -d 3 d:/data/JT65-HF/150919_2005.wav

    -- Joe, K1JT

On 2/15/2017 12:27 PM, Black Michael wrote:
> How does one run decoding against a set of WAV files that does the same
> thing as WSJT-X?
>
> I've tried this:
> jt9 -d 3 -9 -6 -S 2400 test.wav
>
> But it misses a lot of JT65 decodes.
>
> de Mike W9MDB
>
>
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