Dear Sir/Ma'am Hi, I am trying to view the comparison files using ACT tool. I have been working with MUMmer, and I got the comparison file generated by MUMmer (using NUCmer function -> .coords file). as I know, ACT can read the output of MUMmer. however, when loading the comparison file in ACT, I got error message about comparison file format. I don't know which files to use.. Do I need a parser for my MUMmer output files? If so, could you let me know how I can parse them using Python code? (I am not a perl person..so if not a complete code, I cannot use them... ) and, I have a one more question.. using ACT tool, can I get the sequences when I selected a part of comparison region?
Thank you very much for your time, Sincerely from Sun-Young Lee ----------------------------------------------------- Sun-Young Lee Laboratory of Genomics & Genomic Medicine Lee Gil Ya Cancer and Diabetes Institute Gachon University of Medicine and Science Tel : +82 32 899 6545 Fax : +82 32 899 6519 Mobile : +82 19 278 0920 e-mail: sy...@gachon.ac.kr; 209ab...@gmail.com ----------------------------------------------------- _______________________________________________ Artemis-users mailing list Artemis-users@sanger.ac.uk http://lists.sanger.ac.uk/mailman/listinfo/artemis-users
