Dear Bruce, thanks for the prompt reply. Doesn't sound too complicated :-) However, all my old versions of mri_convert give the reply unknown option -p I am trying to get the October 2001 version downloaded, unfortunately the connection isn't good enough for new speed records, anyway finally I will get it. Hopefully that version knows about the option -p ;-)
Claus > From [EMAIL PROTECTED] Thu Nov 01 19:20:14 2001 > Envelope-to: [EMAIL PROTECTED] > Delivery-date: Thu, 01 Nov 2001 19:20:14 +0100 > X-Authentication-Warning: surfer.nmr.mgh.harvard.edu: majordomo set sender to >[EMAIL PROTECTED] using -f > Date: Thu, 1 Nov 2001 13:17:39 -0500 (EST) > From: Bruce Fischl <[EMAIL PROTECTED]> > To: <[EMAIL PROTECTED]> > Subject: Re: from flat map to origs > MIME-Version: 1.0 > > Hi Claus, > > you should be able to use mri_convert -p <input patch> <output patch.asc) > to convert a patch to ascii format, and therefore get the voxel coords out > in matlab or whatever. > > cheers, > Bruce > > On Thu, 1 Nov 2001, Claus Tempelmann wrote: > > > Hi everybody, > > > > many people are working with retinotopic maps on flat brains. > > A typical task would be to identify a region on the flat map > > (e.g. V2) and to get a list of all corresponding voxels of the > > anatomical data set (e.g. 3D-scan). I assume some of you have already > > done that with freesurfer tools. I would appreciate if you > > could list the important steps on this way. > > > > Thanks in advance > > > > Claus > > ------------------------------------------------------------------------- > > Claus Tempelmann email: [EMAIL PROTECTED] > > Clinic for Neurology II > > MR department phone: +49-391-6117177 > > OvG University Magdeburg +49-391-6117183 > > Leipziger Strasse 44 > > 39120 Magdeburg fax: +49-391-6117178 > > Germany > > > >
