Apologies, I should've put all this in 1 message. I just wanted to make really sure that things are indeed crashing where we think they are:
I reopened Athena, loaded the cyanobacteria.prj again, grabbed the plot log (no warnings/errors/crashes have appeared in Athena at this point, although the multi plot window is showing only the first subplot out of 4), put it in a .plt file on the desktop, opened a gnu plot terminal independently (from strawberry/c/gnuplot/bin or something like that), loaded the .plt file, and indeed it chokes on the ranges: gnuplot> load 'C:\Users\jorissen\Desktop\gnuplot.plt' "C:\Users\jorissen\Desktop\gnuplot.plt", line 100: Can't plot with an empty x range! multiplot> The full .plt file is: ## ## ======== NEW PLOT ======== set output set encoding iso_8859_15 set terminal wxt 1 font 'Arial,8' enhanced dashed title "Athena[Plot.1]" set origin 0.01,0.01 set size 0.99,0.99 set autoscale unset label unset logscale unset xrange unset xtics set xtics ## line styles w=1 set style line 1 linecolor rgb "blue" linetype 1 linewidth w pointsize 1 pointtype 7 set style line 2 linecolor rgb "red" linetype 1 linewidth w pointsize 1 set style line 3 linecolor rgb "dark-green" linetype 1 linewidth w pointsize 1 set style line 4 linecolor rgb "dark-violet" linetype 1 linewidth w pointsize 1 set style line 5 linecolor rgb "yellow4" linetype 1 linewidth w pointsize 1 set style line 6 linecolor rgb "brown" linetype 1 linewidth w pointsize 1 set style line 7 linecolor rgb "dark-pink" linetype 1 linewidth w pointsize 1 set style line 8 linecolor rgb "gold" linetype 1 linewidth w pointsize 1 set style line 9 linecolor rgb "dark-cyan" linetype 1 linewidth w pointsize 1 set style line 10 linecolor rgb "spring-green" linetype 1 linewidth w pointsize 1 ## marker styles set style line 12 linecolor rgb "#EE9A00" ## indicator styles set style line 16 linecolor rgb "#8F3910" lt 3 lw 1.5 set style arrow 1 nohead ls 16 unset arrow ## plot formatting set style line 20 linecolor rgb "#cccccc" set grid ls 20 set key top right width 1 height 1 box set label 99 '{/*0.6 Demeter 0.9.19 {\251} Bruce Ravel 2006-2014}' at screen 0.7, screen 0.02 font 'Arial' ## ## ======== NEW PLOT ======== set output set encoding iso_8859_15 set terminal wxt 1 font 'Arial,8' enhanced dashed title "Athena[Plot.1]" set origin 0.01,0.01 set size 0.99,0.99 set autoscale unset label unset logscale unset xrange unset xtics set xtics ## line styles w=1 set style line 1 linecolor rgb "blue" linetype 1 linewidth w pointsize 1 pointtype 7 set style line 2 linecolor rgb "red" linetype 1 linewidth w pointsize 1 set style line 3 linecolor rgb "dark-green" linetype 1 linewidth w pointsize 1 set style line 4 linecolor rgb "dark-violet" linetype 1 linewidth w pointsize 1 set style line 5 linecolor rgb "yellow4" linetype 1 linewidth w pointsize 1 set style line 6 linecolor rgb "brown" linetype 1 linewidth w pointsize 1 set style line 7 linecolor rgb "dark-pink" linetype 1 linewidth w pointsize 1 set style line 8 linecolor rgb "gold" linetype 1 linewidth w pointsize 1 set style line 9 linecolor rgb "dark-cyan" linetype 1 linewidth w pointsize 1 set style line 10 linecolor rgb "spring-green" linetype 1 linewidth w pointsize 1 ## marker styles set style line 12 linecolor rgb "#EE9A00" ## indicator styles set style line 16 linecolor rgb "#8F3910" lt 3 lw 1.5 set style arrow 1 nohead ls 16 unset arrow ## plot formatting set style line 20 linecolor rgb "#cccccc" set grid ls 20 set key top right width 1 height 1 box # 0.12: ifeffit group = ozun set multiplot layout 2,2 unset key unset label ## energy quadrant set title "{/*1.6 Energy}" set xlabel "{/*1.4 Energy&{aa}(eV)}" set ylabel "{/*1.4 x{/Symbol m}(E)}" #set xrange [ 11918.952 : 11918.952 ] plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_nkxkgsoz' using 1:2 with lines ls 2,\ 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_klrzlnbv' using 1:2 with lines ls 1,\ 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_ducluvgs' using 1:2 with lines ls 3,\ 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_mtjutfnz' using 1:2 with lines ls 4 ## k quadrant set title "{/*1.5 k-space}" set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}" set ylabel "{/*1.2 k^{2} {\267} {/Symbol c}(k)&{aa}({\305}^{-2})}" set xrange [ 0 : 0 ] plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_rcaunifm' using 1:2 with lines ls 1 ## R quadrant set title "{/*1.5 R-space}" set xlabel "{/*1.2 Radial distance&{aa}({\305})}" set ylabel "{/*1.2 {/*1.25 |}{/Symbol c}(R){/*1.25 |}&{aa}({\305}^{-3})}" set xrange [ 0 : 0 ] plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_ogmlhgdf' using 1:2 with lines ls 1,\ 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_ginwmqtf' using 1:2 with lines ls 2 ## q quadrant set title "{/*1.5 q-space}" set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}" set ylabel "{/*1.2 {/*1.25 Re[}{/Symbol c}(q){/*1.25 ]}&{aa}({\305}^{-2})}" set xrange [ 0 : 0 ] plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_fdnmbmdz' using 1:2 with lines ls 1 unset multiplot On Tue, Jan 14, 2014 at 5:47 PM, Kevin Jorissen <kevinjorissen...@gmail.com>wrote: > -- just to be clear, the pasted section of the log is not the bottom part. > It is followed by many more lines containing gnu plot settings (but no > "plot" commands). > > Cheers, > > Kevin > > > > On Tue, Jan 14, 2014 at 5:38 PM, Kevin Jorissen < > kevinjorissen...@gmail.com> wrote: > >> Out of curiosity, I installed 09.19 on a fresh Win8.1 64bit under VMWare. >> No problems during installation. I opened the cyanobacteria.prj data from >> Bruce's sample data repo in Athena. After clicking around a few times >> (specifically, clicking the green arrow and the magnifying glass+red curve >> next to it in the toolbar of the plot window), I caused a "gnu plot.exe has >> stopped working" error. Going into the monitor for the plotting log, I see >> a similar x-range problem as discovered by Robert Gordon: >> >> ## energy quadrant >> >> set title "{/*1.6 Energy}" >> >> set xlabel "{/*1.4 Energy&{aa}(eV)}" >> >> set ylabel "{/*1.4 x{/Symbol m}(E)}" >> >> #set xrange [ 11918.952 : 11918.952 ] >> >> plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_lydqknai' using >> 1:2 with lines ls 2,\ >> >> 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_kpklgmnh' using >> 1:2 with lines ls 1,\ >> >> 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_djrhchms' using >> 1:2 with lines ls 3,\ >> >> 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_geakjukk' using >> 1:2 with lines ls 4 >> >> >> ## k quadrant >> >> set title "{/*1.5 k-space}" >> >> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}" >> >> set ylabel "{/*1.2 k^{2} {\267} {/Symbol c}(k)&{aa}({\305}^{-2})}" >> >> set xrange [ 0 : 0 ] >> >> plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_vyutwjzc' using >> 1:2 with lines ls 1 >> >> >> ## R quadrant >> >> set title "{/*1.5 R-space}" >> >> set xlabel "{/*1.2 Radial distance&{aa}({\305})}" >> >> set ylabel "{/*1.2 {/*1.25 |}{/Symbol c}(R){/*1.25 |}&{aa}({\305}^{-3})}" >> >> set xrange [ 0 : 0 ] >> >> plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_qeqqfnof' using >> 1:2 with lines ls 1,\ >> >> 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_njjlolaa' using >> 1:2 with lines ls 2 >> >> >> ## q quadrant >> >> set title "{/*1.5 q-space}" >> >> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}" >> >> set ylabel "{/*1.2 {/*1.25 Re[}{/Symbol c}(q){/*1.25 >> ]}&{aa}({\305}^{-2})}" >> >> set xrange [ 0 : 0 ] >> >> plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_ydrraees' using >> 1:2 with lines ls 1 >> >> >> So, I'm not offering anything new in this message, but perhaps confirming >> someone else's experience can help. To be clear, this VM has never seen >> any kind of Demeter, perl, gnu plot, ... before this experiment. It's a >> clean Windows (I only added java and feff9 on it at an earlier time) and >> current with all windows updates. >> >> >> Cheers, >> >> >> Kevin >> >> >> >> >> >> >> On Tue, Jan 14, 2014 at 2:17 PM, Robert Gordon <ragor...@alumni.sfu.ca>wrote: >> >>> Installing 0.9.19 overtop of 0.9.18.2 and Athena works fine. >>> >>> Installing 0.9.19 clean (deleting demeter directory under >>> appdata/roaming) >>> 2nd attempt to open file in DAthena results in only 1 mini-graph. >>> >>> Ranges are 0 for Emin/max, kmin/max, Rmin/max - putting a valid range >>> restores >>> full graph e.g. Rmin = 0 , Rmax = 6 gives full-size R-space >>> graph...ditto for fixing other >>> ranges. Fixed 3 out of 4 and read in a new file...obtained 3 >>> mini-graphs...reset q range >>> as well and that one appears too. >>> >>> Exited. Restarted. Read in file - >>> Show Command Buffer/Plot Buffer >>> ## energy quadrant >>> set title "{/*1.6 Energy}" >>> set xlabel "{/*1.4 Energy&{aa}(eV)}" >>> set ylabel "{/*1.4 x{/Symbol m}(E)}" >>> #set xrange [ 11870.11617648 : 11870.11617648 ] >>> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_vlxtfjcm' >>> using 1:2 with lines ls 2,\ >>> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_tfoziltm' >>> using 1:2 with lines ls 1,\ >>> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_fthredqy' >>> using 1:2 with lines ls 3,\ >>> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_iebbuian' >>> using 1:2 with lines ls 4 >>> >>> ## k quadrant >>> set title "{/*1.5 k-space}" >>> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}" >>> set ylabel "{/*1.2 k^{2} {\267} {/Symbol c}(k)&{aa}({\305}^{-2})}" >>> set xrange [ 0 : 0 ] >>> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_xizghpwm' >>> using 1:2 with lines ls 1 >>> >>> ## R quadrant >>> set title "{/*1.5 R-space}" >>> set xlabel "{/*1.2 Radial distance&{aa}({\305})}" >>> set ylabel "{/*1.2 {/*1.25 |}{/Symbol c}(R){/*1.25 |}&{aa}({\305}^{-3})}" >>> set xrange [ 0 : 0 ] >>> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_nwtxpqxm' >>> using 1:2 with lines ls 1,\ >>> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_vysurgrh' >>> using 1:2 with lines ls 2 >>> >>> ## q quadrant >>> set title "{/*1.5 q-space}" >>> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}" >>> set ylabel "{/*1.2 {/*1.25 Re[}{/Symbol c}(q){/*1.25 >>> ]}&{aa}({\305}^{-2})}" >>> set xrange [ 0 : 0 ] >>> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_hxroumyr' >>> using 1:2 with lines ls 1 >>> >>> unset multiplot >>> >>> >>> >>> So, seems to be setting the xranges to zero for a clean install these >>> plots, and gnuplot >>> doesn't plot if no xrange. If I reset, then I can move around and use >>> DAthena 9.19 >>> without issue...DArtemis is still an unhappy DHuntress with fpj files... >>> >>> >>> >>> On 1/14/2014 3:28 PM, Bruce Ravel wrote: >>> >>>> On 01/14/2014 04:11 PM, Robert Gordon wrote: >>>> >>>>> Hi Matt, Shoaib (and Bruce lurking in the luminiferous ether), >>>>> >>>>> I have 8.1 x64 on my laptop and just upgraded to 0.9.19 - clean >>>>> install. >>>>> I can offer some additional details on this problem. >>>>> >>>>> I read in a file in DAthena, extracted the chi(k) and saved the >>>>> project. >>>>> All buttons worked. When the file was read in, 4 mini-graphs displayed, >>>>> and I could select k, E, R as desired for full graph. >>>>> >>>>> The second time I run it, reading in the exact same file, only the >>>>> energy mini-graph >>>>> displays and the E,k and R buttons no longer produce any graphs. >>>>> >>>>> From the clean install, I saved the DAthena.prj. I started DArtemis, >>>>> read in the DAthena.prj >>>>> file, haven't tried fitting but saved the DArtemis fpj file. >>>>> If I try re-opening the fpj file I just saved in DArtemis, DArtemis >>>>> crashes, >>>>> but re-opening the DAthena prj file after starting DArtemis is not a >>>>> problem. >>>>> >>>>> In DAthena, if I go to the appdata/roaming/demeter directory and delete >>>>> the demeter.ini file, >>>>> DAthena will display all 4 mini-graphs when I open the prj file and the >>>>> k,R,E buttons work. >>>>> >>>> >>>> Robert, >>>> >>>> If you are inclined to help me with some troubleshooting, I have a >>>> request. >>>> >>>> If you can recreate the situation where only the energy part of the >>>> quad plot is displayed and the plot buttons stop working, could you >>>> tell me a couple things: >>>> >>>> 1. What are the values for the plotting ranges in E, k, R, and q? >>>> The reason I ask is that I stumbled upon a situation where Emin, >>>> Emax, kmin, etc all got set to zero (as did a bunch of other >>>> parameters). I could not figure out how to reproduce that >>>> problem, but it would be helpful to know if it happened to >>>> someone else. >>>> >>>> 2. In the Monitor menu, click on "Show command buffer". In the >>>> "Plot buffer" at the bottom of the window scroll up just a little >>>> bit to where you'll see lines that say things like >>>> >>>> plot '/home/bruce/.horae/stash/gp_vdnzxmxl' using 1:2 with >>>> lines ls 1,\ >>>> '/home/bruce/.horae/stash/gp_wfaastqg' using 1:2 with >>>> lines ls 2 >>>> >>>> What I want to know is if the 8 random characters after >>>> "stash/gp_" are the same or different (as in my example here). >>>> >>>> In short, I want to know if you have seen some problems I have >>>> observed by not been able to reproduce. >>>> >>>> >>>> 0.9.19 does not appear to be one of my better packaging efforts, alas. >>>> >>>> B >>>> >>>> >>>> >>>> I uninstalled and went back to 0.9.18.2. DAthena seems to work - all 4 >>>>> mini-graphs, and E,k,R work. >>>>> DArtemis still opens, reads DAthena.prj but crashes when trying to read >>>>> fpj file created under 0.9.18.2. >>>>> >>>>> Going back to the last 0.8.0nn versions, no crashes from Artemis or >>>>> Athena. >>>>> >>>>> Hope this helps. >>>>> >>>>> -R. >>>>> >>>>> >>>>> On 1/14/2014 12:38 PM, Matt Newville wrote: >>>>> >>>>>> Hi Shoaib, >>>>>> >>>>>> On Tue, Jan 14, 2014 at 10:46 AM, Shoaib Muhammad >>>>>> <mshoai...@gmail.com> wrote: >>>>>> >>>>>>> Hi, >>>>>>> >>>>>>> >>>>>>> >>>>>>> I have recently upgraded my computer to Windows 8.1 Pro x64 and after >>>>>>> this >>>>>>> upgrade I can’t run Athena and Artemis. The problem symptoms are: >>>>>>> >>>>>>> >>>>>>> >>>>>>> 1- If I use Demeter version 0.9.13, Athena opens but when I try >>>>>>> to open >>>>>>> previously saved file, Athena simply crashes without showing any >>>>>>> error. >>>>>>> Artemis also shows similar behavior. >>>>>>> >>>>>>> 2- By using latest build Demeter 0.9.19, Athena behavior is >>>>>>> slightly >>>>>>> different it opens the files and show the plot. But pressing the >>>>>>> E,k,R >>>>>>> buttons does not change the plot. Artemis still crashes by opening >>>>>>> any >>>>>>> project file without any error. >>>>>>> >>>>>>> >>>>>>> >>>>>>> I have tried following things, installed in compatibility mode of >>>>>>> Windows7. >>>>>>> Athena worked fine only once after installing in compatibility mode. >>>>>>> >>>>>>> Installed in different drives but situations remains the same. Tried >>>>>>> to “run >>>>>>> as Admin” but no improvement. >>>>>>> >>>>>>> Installed Demeter on three different computers running Windows 8.1 >>>>>>> x64 but >>>>>>> similar behavior is received. >>>>>>> >>>>>>> >>>>>>> >>>>>>> Kindly suggest me some work around because I have to use Demeter on >>>>>>> almost >>>>>>> daily basis. I have attached log file obtained from Demeter 0.9.13 >>>>>>> running >>>>>>> under Window 8.1 x64. >>>>>>> >>>>>>> >>>>>>> >>>>>>> Thanks, >>>>>>> >>>>>>> Shoaib Muhammad >>>>>>> >>>>>>> Department of Energy Science >>>>>>> >>>>>>> Sungkyunkwan University >>>>>>> >>>>>>> South Korea >>>>>>> >>>>>>> >>>>>>> _______________________________________________ >>>>>>> Ifeffit mailing list >>>>>>> Ifeffit@millenia.cars.aps.anl.gov >>>>>>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit >>>>>>> >>>>>>> I think you might be in mostly uncharted waters with 64-bit Windows >>>>>> 8. >>>>>> I have access to many Windows machines, but I don't know of any >>>>>> 64-bit Windows 8.1 machines in our group. >>>>>> >>>>>> If you're up for it, it might be worth installing demeter from source >>>>>> from the github repository, following >>>>>> http://bruceravel.github.io/demeter/pods/installation.pod.html >>>>>> and asking for help if you get stuck. >>>>>> >>>>>> I'm sure it would be a great help to others if you did this.... >>>>>> >>>>>> --Matt >>>>>> >>>>>> _______________________________________________ >>>>>> Ifeffit mailing list >>>>>> Ifeffit@millenia.cars.aps.anl.gov >>>>>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit >>>>>> >>>>>> >>>>> >>>> >>>> >>> -- >>> Dr. Robert Gordon >>> Staff Scientist, PNCSRF >>> APS Sector 20 (PNC/XSD) >>> 9700 S Cass Ave. 435E >>> Argonne, IL, USA 60439 >>> >>> 630-252-0581 >>> 630-252-0580 fax >>> >>> _______________________________________________ >>> Ifeffit mailing list >>> Ifeffit@millenia.cars.aps.anl.gov >>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit >>> >> >> >
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