I decided to keep an eye on the build folder and noticed that when I did a 'Clean' project the files were not removed. I did an rm -rf in there to start fresh, did a build and now it works...
René > On May 27, 2016, at 9:05 AM, Kanters, Rene <rkant...@richmond.edu> wrote: > > Bob, > > I did clean builds several times to no avail. I am building the Jmol.jar > using an ant builder setup for the Properties of Jmol, where I specify it to > use Jmol/build.xml buildfile. I think that when I run it directly in Eclipse > is may use the Java Builder set up, but that one is not editable, so I can't > tell what exactly that does. > > I also did an 'override and update' to make sure that I pulled everything > back as it is on the SVN server. The only files I did not allow to overwrite > were the .externalToolBuilders/Jmol.jar.launch (which does not seem to have a > version in SVN, probably something new in Mars.2), > Settings/org.eclipse.jdt.core.pref and .project. (like I had before). > > I do indeed not see the org/jmol/api/JmolBioResolver (and am somewhat > surprised it isn't echoed as org.jmol.apl), so why is there a script that > still seems to know about that and only needs it when I am running the > Jmol.jar (using java -jar Jmol.jar) but not when I am running it from within > eclipse? > > René > >> On May 27, 2016, at 1:44 AM, Robert Hanson <hans...@stolaf.edu >> <mailto:hans...@stolaf.edu>> wrote: >> >> JmolBioResolver was decommissioned. Perhaps you have not fully synchronized. >> Try a clean build. >> >> I have also added those to the release branch, 14.6. >> >> On Thu, May 26, 2016 at 4:04 PM, Kanters, Rene <rkant...@richmond.edu >> <mailto:rkant...@richmond.edu>> wrote: >> Hi, >> >> I just synchronized after having made the changes in the qchem reader this >> morning, and now find that the application when running in the Eclipse >> Mars.2 (Release 4.5.2) run the app fine, but that the Jmol.jar I am creating >> gives an error message when I try to measure things using the console: >> >> $ measure (c2)(c6) >> script ERROR: java.lang.NoSuchMethodError: >> org.jmol.viewer.Viewer.getJBR()Lorg/jmol/api/JmolBioResolver; >> >> Does anybody have any idea why that started happening? >> >> René >> >> >> ------------------------------------------------------------------------------ >> Mobile security can be enabling, not merely restricting. Employees who >> bring their own devices (BYOD) to work are irked by the imposition of MDM >> restrictions. Mobile Device Manager Plus allows you to control only the >> apps on BYO-devices by containerizing them, leaving personal data untouched! >> https://ad.doubleclick.net/ddm/clk/304595813;131938128;j >> <https://ad.doubleclick.net/ddm/clk/304595813;131938128;j> >> _______________________________________________ >> Jmol-developers mailing list >> Jmol-developers@lists.sourceforge.net >> <mailto:Jmol-developers@lists.sourceforge.net> >> https://lists.sourceforge.net/lists/listinfo/jmol-developers >> <https://lists.sourceforge.net/lists/listinfo/jmol-developers> >> >> >> >> >> -- >> Robert M. Hanson >> Larson-Anderson Professor of Chemistry >> St. Olaf College >> Northfield, MN >> http://www.stolaf.edu/people/hansonr <http://www.stolaf.edu/people/hansonr> >> >> >> If nature does not answer first what we want, >> it is better to take what answer we get. >> >> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >> >> ------------------------------------------------------------------------------ >> What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic >> patterns at an interface-level. Reveals which users, apps, and protocols are >> consuming the most bandwidth. Provides multi-vendor support for NetFlow, >> J-Flow, sFlow and other flows. Make informed decisions using capacity >> planning reports. >> https://ad.doubleclick.net/ddm/clk/305295220;132659582;e_______________________________________________ >> >> <https://ad.doubleclick.net/ddm/clk/305295220;132659582;e_______________________________________________> >> Jmol-developers mailing list >> Jmol-developers@lists.sourceforge.net >> <mailto:Jmol-developers@lists.sourceforge.net> >> https://lists.sourceforge.net/lists/listinfo/jmol-developers > > ------------------------------------------------------------------------------ > What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic > patterns at an interface-level. Reveals which users, apps, and protocols are > consuming the most bandwidth. Provides multi-vendor support for NetFlow, > J-Flow, sFlow and other flows. Make informed decisions using capacity > planning reports. > https://ad.doubleclick.net/ddm/clk/305295220;132659582;e_______________________________________________ > Jmol-developers mailing list > Jmol-developers@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/jmol-developers
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