You have to make sure you do
run as.... and then select the "clean" option. You can't just use
Project...clean
Bob
On Fri, May 27, 2016 at 10:32 AM, Kanters, Rene <rkant...@richmond.edu>
wrote:
> I always thought that it 'cleaning' it means that it would remove all
> those files, which is why I was so surprised that it didn't do it. I guess
> it has something to do with what is in the build.xml file, but I have never
> understood the ant build files well enough to mess with those....
>
> On May 27, 2016, at 10:30 AM, Robert Hanson <hans...@stolaf.edu> wrote:
>
> yes, that's right. If you figure how to make "Project Clean" remove the
> build files, that would be great. We could set that up.
>
> On Fri, May 27, 2016 at 9:10 AM, Kanters, Rene <rkant...@richmond.edu>
> wrote:
>
>> I decided to keep an eye on the build folder and noticed that when I did
>> a 'Clean' project the files were not removed. I did an rm -rf in there to
>> start fresh, did a build and now it works...
>>
>> René
>>
>> On May 27, 2016, at 9:05 AM, Kanters, Rene <rkant...@richmond.edu> wrote:
>>
>> Bob,
>>
>> I did clean builds several times to no avail. I am building the Jmol.jar
>> using an ant builder setup for the Properties of Jmol, where I specify it
>> to use Jmol/build.xml buildfile. I think that when I run it directly in
>> Eclipse is may use the Java Builder set up, but that one is not editable,
>> so I can't tell what exactly that does.
>>
>> I also did an 'override and update' to make sure that I pulled everything
>> back as it is on the SVN server. The only files I did not allow to
>> overwrite were the .externalToolBuilders/Jmol.jar.launch (which does not
>> seem to have a version in SVN, probably something new in Mars.2),
>> Settings/org.eclipse.jdt.core.pref and .project. (like I had before).
>>
>> I do indeed not see the org/jmol/api/JmolBioResolver (and am somewhat
>> surprised it isn't echoed as org.jmol.apl), so why is there a script that
>> still seems to know about that and only needs it when I am running the
>> Jmol.jar (using java -jar Jmol.jar) but not when I am running it from
>> within eclipse?
>>
>> René
>>
>> On May 27, 2016, at 1:44 AM, Robert Hanson <hans...@stolaf.edu> wrote:
>>
>> JmolBioResolver was decommissioned. Perhaps you have not fully
>> synchronized. Try a clean build.
>>
>> I have also added those to the release branch, 14.6.
>>
>> On Thu, May 26, 2016 at 4:04 PM, Kanters, Rene <rkant...@richmond.edu>
>> wrote:
>>
>>> Hi,
>>>
>>> I just synchronized after having made the changes in the qchem reader
>>> this morning, and now find that the application when running in the Eclipse
>>> Mars.2 (Release 4.5.2) run the app fine, but that the Jmol.jar I am
>>> creating gives an error message when I try to measure things using the
>>> console:
>>>
>>> $ measure (c2)(c6)
>>> script ERROR: java.lang.NoSuchMethodError:
>>> org.jmol.viewer.Viewer.getJBR()Lorg/jmol/api/JmolBioResolver;
>>>
>>> Does anybody have any idea why that started happening?
>>>
>>> René
>>>
>>>
>>>
>>> ------------------------------------------------------------------------------
>>> Mobile security can be enabling, not merely restricting. Employees who
>>> bring their own devices (BYOD) to work are irked by the imposition of MDM
>>> restrictions. Mobile Device Manager Plus allows you to control only the
>>> apps on BYO-devices by containerizing them, leaving personal data
>>> untouched!
>>> https://ad.doubleclick.net/ddm/clk/304595813;131938128;j
>>> _______________________________________________
>>> Jmol-developers mailing list
>>> Jmol-developers@lists.sourceforge.net
>>> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>>>
>>>
>>
>>
>> --
>> Robert M. Hanson
>> Larson-Anderson Professor of Chemistry
>> St. Olaf College
>> Northfield, MN
>> http://www.stolaf.edu/people/hansonr
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>>
>> ------------------------------------------------------------------------------
>> What NetFlow Analyzer can do for you? Monitors network bandwidth and
>> traffic
>> patterns at an interface-level. Reveals which users, apps, and protocols
>> are
>> consuming the most bandwidth. Provides multi-vendor support for NetFlow,
>> J-Flow, sFlow and other flows. Make informed decisions using capacity
>> planning reports.
>> https://ad.doubleclick.net/ddm/clk/305295220;132659582;e_______________________________________________
>> Jmol-developers mailing list
>> Jmol-developers@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>>
>>
>>
>> ------------------------------------------------------------------------------
>> What NetFlow Analyzer can do for you? Monitors network bandwidth and
>> traffic
>> patterns at an interface-level. Reveals which users, apps, and protocols
>> are
>> consuming the most bandwidth. Provides multi-vendor support for NetFlow,
>> J-Flow, sFlow and other flows. Make informed decisions using capacity
>> planning reports.
>> https://ad.doubleclick.net/ddm/clk/305295220;132659582;e_______________________________________________
>> Jmol-developers mailing list
>> Jmol-developers@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>>
>>
>>
>>
>> ------------------------------------------------------------------------------
>> What NetFlow Analyzer can do for you? Monitors network bandwidth and
>> traffic
>> patterns at an interface-level. Reveals which users, apps, and protocols
>> are
>> consuming the most bandwidth. Provides multi-vendor support for NetFlow,
>> J-Flow, sFlow and other flows. Make informed decisions using capacity
>> planning reports.
>> https://ad.doubleclick.net/ddm/clk/305295220;132659582;e
>> _______________________________________________
>> Jmol-developers mailing list
>> Jmol-developers@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>>
>>
>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
>
> ------------------------------------------------------------------------------
> What NetFlow Analyzer can do for you? Monitors network bandwidth and
> traffic
> patterns at an interface-level. Reveals which users, apps, and protocols
> are
> consuming the most bandwidth. Provides multi-vendor support for NetFlow,
> J-Flow, sFlow and other flows. Make informed decisions using capacity
> planning reports.
> https://ad.doubleclick.net/ddm/clk/305295220;132659582;e_______________________________________________
> Jmol-developers mailing list
> Jmol-developers@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>
>
>
>
> ------------------------------------------------------------------------------
> What NetFlow Analyzer can do for you? Monitors network bandwidth and
> traffic
> patterns at an interface-level. Reveals which users, apps, and protocols
> are
> consuming the most bandwidth. Provides multi-vendor support for NetFlow,
> J-Flow, sFlow and other flows. Make informed decisions using capacity
> planning reports. https://ad.doubleclick.net/ddm/clk/305295220;132659582;e
> _______________________________________________
> Jmol-developers mailing list
> Jmol-developers@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>
>
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are
consuming the most bandwidth. Provides multi-vendor support for NetFlow,
J-Flow, sFlow and other flows. Make informed decisions using capacity
planning reports. https://ad.doubleclick.net/ddm/clk/305295220;132659582;e
_______________________________________________
Jmol-developers mailing list
Jmol-developers@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/jmol-developers
