Le 07/03/2017 à 19:00, Markus Metz a écrit :
> Does anybody have a suggestion how I might change the molecular 
> representation?

Dear Markus,

If you want a clever image, you could use pymol in XML-RPC mode 
or draw an image with thicker bonds 
(http://asteeves.github.io/blog/2015/01/12/optimizing-in-rdkit/, but 
check also http://asteeves.github.io/blog/2015/01/14/editing-in-rdkit/ 
especially the second point for drawing parameters).

I'm not 100% sure it will be perfect for your needs, especially if you 
have large molecules (or a lot of them), but at least you have entry 
pointers to dig with.



Lecturer, UFIP, UMR 6286 CNRS, Team Protein Design In Silico
UFR Sciences et Techniques, 2, rue de la Houssinière, Bât. 25, 44322 Nantes 
cedex 03, France
Tél : +33 251 125 636 / Fax : +33 251 125 632
http://www.ufip.univ-nantes.fr/ - http://www.steletch.org

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