Re: [Jmol-developers] JSmol dipole bug?
Thank you! I will update Jmol ASAP Op Mon Jan 19 2015 at 23:53:48 schreef Robert Hanson hans...@stolaf.edu: Sorry about that! Jmol.___JmolVersion=14.3.11_2015.01.19 bug fix: DIPOLE command broken in Jmol 14.3.10_2014.11.27 (OK in 14.2) releasing later today On Mon, Jan 19, 2015 at 1:32 PM, Herman Bergwerf hermanbergw...@gmail.com wrote: select *; calculate partialcharge; dipole bonds on; dipole calculate bonds; This script is not working for me any more (no dipoles are drawn) I downloaded an old JSmol version (from may last year) and tested using this page: http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm (but from the zip instead of course) Can you please fix this? -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet ___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Department of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers
Re: [Jmol-developers] JSmol dipole bug?
Understood. Jmol.zip at that site is not always the latest. I can be more diligent in making it so, though. This chemapps site is really for development only. I would not recommend upgrading automatically from it. Sort of a nightly idea. All the actual releases are at SourceForge. Bob On Tue, Jan 20, 2015 at 10:42 AM, Herman Bergwerf hermanbergw...@gmail.com wrote: Btw. I've written an update script for my application which uses wget and unzip to update Jmol and JSmol. I'm using http://chemapps.stolaf.edu/jmol/zip/Jmol.zip but it looks like thats not the latest version according to the dates in http://chemapps.stolaf.edu/jmol/zip/. Is this only temporary? Or is there maybe another way to auto update Jmol? A zip is fine for me but there should be an official current release URL. Would it be possible to put it on GitHub? http://jmol.sourceforge.net/ seems a bit behind... If Jmol/JSmol does not use git, you should definitely use BitBucket. In GitHub you can do some pretty nice stuff with tags and releases. Op Tue Jan 20 2015 at 12:06:23 PM schreef Herman Bergwerf hermanbergw...@gmail.com: Thank you! I will update Jmol ASAP Op Mon Jan 19 2015 at 23:53:48 schreef Robert Hanson hans...@stolaf.edu : Sorry about that! Jmol.___JmolVersion=14.3.11_2015.01.19 bug fix: DIPOLE command broken in Jmol 14.3.10_2014.11.27 (OK in 14.2) releasing later today On Mon, Jan 19, 2015 at 1:32 PM, Herman Bergwerf hermanbergw...@gmail.com wrote: select *; calculate partialcharge; dipole bonds on; dipole calculate bonds; This script is not working for me any more (no dipoles are drawn) I downloaded an old JSmol version (from may last year) and tested using this page: http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm (but from the zip instead of course) Can you please fix this? -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet ___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Department of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet_ __ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet ___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Department of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers
Re: [Jmol-developers] JSmol dipole bug?
I understand your point about the unstable zips. I added sourceforge to my update/build script (the newest version is just very tempting most of the time, especially after a bugfix) So I fetched the latest Jmol/JSmol version from SourgeFourge (14.2.9_2014.11.23) I think I will stick to sourgefourge for molview.org Op Tue Jan 20 2015 at 6:31:48 PM schreef Robert Hanson hans...@stolaf.edu: Understood. Jmol.zip at that site is not always the latest. I can be more diligent in making it so, though. This chemapps site is really for development only. I would not recommend upgrading automatically from it. Sort of a nightly idea. All the actual releases are at SourceForge. Bob On Tue, Jan 20, 2015 at 10:42 AM, Herman Bergwerf hermanbergw...@gmail.com wrote: Btw. I've written an update script for my application which uses wget and unzip to update Jmol and JSmol. I'm using http://chemapps.stolaf.edu/jmol/zip/Jmol.zip but it looks like thats not the latest version according to the dates in http://chemapps.stolaf.edu/jmol/zip/. Is this only temporary? Or is there maybe another way to auto update Jmol? A zip is fine for me but there should be an official current release URL. Would it be possible to put it on GitHub? http://jmol.sourceforge.net/ seems a bit behind... If Jmol/JSmol does not use git, you should definitely use BitBucket. In GitHub you can do some pretty nice stuff with tags and releases. Op Tue Jan 20 2015 at 12:06:23 PM schreef Herman Bergwerf hermanbergw...@gmail.com: Thank you! I will update Jmol ASAP Op Mon Jan 19 2015 at 23:53:48 schreef Robert Hanson hans...@stolaf.edu : Sorry about that! Jmol.___JmolVersion=14.3.11_2015.01.19 bug fix: DIPOLE command broken in Jmol 14.3.10_2014.11.27 (OK in 14.2) releasing later today On Mon, Jan 19, 2015 at 1:32 PM, Herman Bergwerf hermanbergw...@gmail.com wrote: select *; calculate partialcharge; dipole bonds on; dipole calculate bonds; This script is not working for me any more (no dipoles are drawn) I downloaded an old JSmol version (from may last year) and tested using this page: http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm (but from the zip instead of course) Can you please fix this? -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet ___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Department of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet_ __ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet ___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Department of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely
Re: [Jmol-developers] JSmol dipole bug?
See http://chemapps.stolaf.edu/jmol/zip/jmol-14.3.11_2015.01.20.zip This will read 2015.01.19 but its date should be today. Jmol.___JmolVersion=14.3.11_2015.01.19 bug fix: Languages lost in Jmol Application -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers
Re: [Jmol-developers] JSmol dipole bug?
Actually, that just got updated. You will need that for your fix. On Tue, Jan 20, 2015 at 1:04 PM, Herman Bergwerf hermanbergw...@gmail.com wrote: I understand your point about the unstable zips. I added sourceforge to my update/build script (the newest version is just very tempting most of the time, especially after a bugfix) So I fetched the latest Jmol/JSmol version from SourgeFourge (14.2.9_2014.11.23) I think I will stick to sourgefourge for molview.org Op Tue Jan 20 2015 at 6:31:48 PM schreef Robert Hanson hans...@stolaf.edu : Understood. Jmol.zip at that site is not always the latest. I can be more diligent in making it so, though. This chemapps site is really for development only. I would not recommend upgrading automatically from it. Sort of a nightly idea. All the actual releases are at SourceForge. Bob On Tue, Jan 20, 2015 at 10:42 AM, Herman Bergwerf hermanbergw...@gmail.com wrote: Btw. I've written an update script for my application which uses wget and unzip to update Jmol and JSmol. I'm using http://chemapps.stolaf.edu/jmol/zip/Jmol.zip but it looks like thats not the latest version according to the dates in http://chemapps.stolaf.edu/jmol/zip/. Is this only temporary? Or is there maybe another way to auto update Jmol? A zip is fine for me but there should be an official current release URL. Would it be possible to put it on GitHub? http://jmol.sourceforge.net/ seems a bit behind... If Jmol/JSmol does not use git, you should definitely use BitBucket. In GitHub you can do some pretty nice stuff with tags and releases. Op Tue Jan 20 2015 at 12:06:23 PM schreef Herman Bergwerf hermanbergw...@gmail.com: Thank you! I will update Jmol ASAP Op Mon Jan 19 2015 at 23:53:48 schreef Robert Hanson hans...@stolaf.edu: Sorry about that! Jmol.___JmolVersion=14.3.11_2015.01.19 bug fix: DIPOLE command broken in Jmol 14.3.10_2014.11.27 (OK in 14.2) releasing later today On Mon, Jan 19, 2015 at 1:32 PM, Herman Bergwerf hermanbergw...@gmail.com wrote: select *; calculate partialcharge; dipole bonds on; dipole calculate bonds; This script is not working for me any more (no dipoles are drawn) I downloaded an old JSmol version (from may last year) and tested using this page: http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm (but from the zip instead of course) Can you please fix this? -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet ___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Department of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet_ __ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet ___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Department of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a
Re: [Jmol-developers] JSmol dipole bug?
Sorry about that! Jmol.___JmolVersion=14.3.11_2015.01.19 bug fix: DIPOLE command broken in Jmol 14.3.10_2014.11.27 (OK in 14.2) releasing later today On Mon, Jan 19, 2015 at 1:32 PM, Herman Bergwerf hermanbergw...@gmail.com wrote: select *; calculate partialcharge; dipole bonds on; dipole calculate bonds; This script is not working for me any more (no dipoles are drawn) I downloaded an old JSmol version (from may last year) and tested using this page: http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm (but from the zip instead of course) Can you please fix this? -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet ___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Department of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet___ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers
