Hi Lionel
You can use the feature selector to locate the pseudogenes. From the
'Select' menu open the 'Feature Selector'. Select the Key and Qualifier (CDS
and pseudo) to search for and click the 'View' button. This will list those
features with that qualifier in a separate window. You can use that list to
select the features and the up and down arrows, on the keyboard, to move the
feature display in the Artemis window to each in turn.
For ACT, if you want to use shortcuts (other than edit selected feature) on
any of the sequences you need to use the 'ALT' key with the shortcut, e.g.
ALT+T to trim to any met.
Regards
Tim
On 7/20/10 8:22 AM, Lionel Guy guy.lio...@gmail.com wrote:
Hi all,
Is there a way to search for the presence of a certain qualifier in
artemis? For example, I have pseudogenes in the genome I'm analyzing,
and they are tagged in gene features with the qualifier /pseudo
(without a value). Is there a way to list them/navigate between them?
Another unrelated question: in ACT, is there a way to use keyboard
shortcuts (edit, view features, bring the navigator, for example) on
another line (i.e. genome) than the first one? I use to have my
genome of interest in the middle, to better see the differences with
other genomes, but it's a bit annoying not to be able to directly
access genes in the one I'm interested in.
Any help appreciated!
Regards,
Lionel
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