Dear all,
together with two fellow crystallographers,
I am writing a pamphlet to introduce schoolchildren
to X-ray crystallography.
For the introductory chapter,
we would need a picture of X-rays scattered by air.
Or by any gas for that matter.
I have tried Google images without much luck.
Can
HKL2000 sets to 0 the Rmerge in any shell where it is higher than 100%
OUCH
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Dr. Pietro Roversi
Oxford University Biochemistry Department - Glycobiology Division
South Parks Road
Oxford OX1 3QU England - UK
Tel. 0044 1865 275339
From
...)
All textbooks I know on the argument neglect to mention this
and in fact only n=1 is ever considered.
Does anybody know a book where this trivial issue is discussed?
Thanks!
Ciao
Pietro
Sent from my Desktop
Dr. Pietro Roversi
Oxford University Biochemistry Department - Glycobiology
all contributors to the thread!
Regards
Pietro
Sent from my Desktop
Dr. Pietro Roversi
Oxford University Biochemistry Department - Glycobiology Division
South Parks Road
Oxford OX1 3QU England - UK
Tel. 0044 1865 275339
From: CCP4 bulletin board [CCP4BB
the intramolecular heavy-atom Patterson vectors.
Has anyone ever had such data and tried that strategy?
Is it implemented in any of the currently available difference
Patterson-solvers/heavy atom finders?
Ciao!
Pietro
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Dr. Pietro Roversi
Oxford University Biochemistry Department
went up into the beam.
Ciao
Pietro
Sent from my Desktop
Dr. Pietro Roversi
Oxford University Biochemistry Department - Glycobiology Division
South Parks Road
Oxford OX1 3QU England - UK
Tel. 0044 1865 275339
From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK
Dear all,
I am looking into a 2D-bar code scanner to read Hampton pins barcodes.
Something we can plug directly to any computer running Windows, Mac or Linux,
via a supplied USB cable, and feed the barcodes into Excel.
Does anybody know a cheaper alternative to the FOCUS MS-1690-38?
Grazie,
to be
used in a Molecular
Replacement rotation search? Our search model is an elongated
object and we are searching in a cell with a=205 b=100 c=21
Angstrom ... ;-)
Ciao
Pietro
--
Pietro Roversi
Sir William Dunn
!
Pietro
--
Pietro Roversi
Sir William Dunn School of Pathology, Oxford University
South Parks Road, Oxford OX1 3ER, England UK
Tel. 0044-1865-275385
Hello Sun,
Roman Hillig and I refined a mixture of ADP+PO4 and ATP in
the active site of ARL2 - it is enough to exclude all contacts of the
superposing ligands and let the occupancies refine. The protocol we followed is
described in:
Hanzal-Bayer M, Renault L, Roversi P,
Dear Michele,
I think your MR solution is on a different allowed
origin - that's all
Ciao
Pietro
--
Pietro Roversi
Sir William Dunn School of Pathology, Oxford University
South Parks Road, Oxford OX1 3ER, England UK
Tel. 0044-1865-275385
afterwards on the
scaled/merged file)
Thanks
Pietro
--
Pietro Roversi
Sir William Dunn School of Pathology, Oxford University
South Parks Road, Oxford OX1 3ER, England UK
Tel. 0044-1865-275385
Hi Larry,
here is how I'd do it:
mapmask MAPIN your.map MAPOUT padded.map EOF
SYMMETRY 1
XYZLIM CELL
PAD 0.0
END
EOF
Good luck with it!
Ciao
Pietro
--
Pietro Roversi
Sir William Dunn School of Pathology, Oxford University
South Parks Road, Oxford OX1 3ER, England UK
Tel
did they solve it? I
would rather avoid digging into the code if I can!
Best regards
Pietro
--
Pietro Roversi
Sir William Dunn School of Pathology, Oxford University
South Parks Road, Oxford OX1 3ER, England UK
Tel. 0044-1865-275385
Dallos Laboratory
F. Searle 1-240
2240 Campus Drive
Evanston IL 60208
lab: 847.491.2438
cel: 773.608.9185
email: [EMAIL PROTECTED]
***
--
Pietro Roversi
Sir William Dunn School of Pathology, Oxford University
South Parks Road, Oxford OX1 3RE, England UK
Tel
therein.
Regards
Pietro
--
Pietro Roversi
EP Abraham Fellow in Biochemistry - Lincoln College - Oxford
Sir William Dunn School of Pathology, Oxford University
South Parks Road, Oxford OX1 3RE, England UK
Tel. 0044-1865-275385
in dm in
the high-resolution
form. Admittedly this extra crystal form has 90% solvent! So if possible
at all
use dmmulti and multi-crystal averaging.
I hope this helps!
Pietro
--
Pietro Roversi
EP Abraham Fellow in Biochemistry - Lincoln College - Oxford
Sir William Dunn School of Pathology
Dear all,
How do I set up a Refmac dictionary to constrain octahedrally coordinated Ca++?
Refmac5 seems to detect the potential bond between the Ca++ and the ligands:
INFO: link is found (not be used) dist= 2.229 ideal_dist= 2.320
ch:AA res: 263 GLU at:O .-ch:Ag
Dear all,
just to add that Clemens Vonrhein already a few years ago has implemented a
procedure
similar to the one Simon describes, to automatically fill the cavities in the
macromolecule
before computing the mask for the solvent, thus avoiding placing solvent where
the core of the protein is,
)?
Thanks!
Ciao
Pietro
--
Pietro Roversi
EP Abraham Fellow in Biochemistry - Lincoln College - Oxford
Sir William Dunn School of Pathology, Oxford University
South Parks Road, Oxford OX1 3RE, England UK
Tel. 0044-1865-275385
returned 1 exit status
make: *** [fasta36] Error 1
Googling for this -lz ld flag does not seem to hit anything immediately
relevant in the top pages.
Please help!
Pietro
Sent from my Desktop
Dr. Pietro Roversi
Oxford University Biochemistry Department - Glycobiology Division
South Parks Road
ll is done in good faith but sometimes on-trust policy
+ absence of a "court" to appeal to in case of misconduct are a rather
insufficient combination when it comes to PDB depositions/withdrawals.
with best wishes,
Pietro
best regards,
Sanchayita Sen
PDBe Depositions
Sent from my
implicitly -
the push for a change in which IP is handled in Universities.
Let's see which way it goes but I remain hopeful
with best wishes
Pietro
=
Dr. Pietro Roversi
As of July 2018 I shall take up a two-year
LISCB and Leicester-Wellcome Trust ISSF
--
Dr. Pietro Roversi, PhD
Italian National Research Council (CNR)
Institute of agricultural biology and biotechnology (IBBA-CNR)
Via Edoardo Bassini 15, 20133 Milano, Italy
Tel. +39 02 23699428
Mobile +39 351 6800096
Fax: +39 02 23699411
https://ibba.cnr.it/en/staff/pietro-roversi/
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Dr. Pietro Roversi, PhD
Italian National Research Council (CNR)
Institute of agricultural biology and biotechnology (IBBA-CNR)
Via Edoardo Bassini 15, 20133 Milano, Italy
Tel. +39 02 23699428
Mobile +39 351 6800096
Fax: +39 02 23699411
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--
Dr. Pietro Roversi, PhD
Italian National Research Council (CNR)
Institute of agricultural biology and biotechnology (IBBA-CNR)
Via Edoardo Bassini 15, 20133 Milano, Italy
Tel. +39 02 23699428
Mobile +39 351 6800096
Fax: +39 02 236994
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Dr. Pietro Roversi, PhD
Italian National Research Council (CNR)
Institute of agricultural biology and biotechnology (IBBA-CNR)
Via Edoardo Bassini 15, 20133 Milano,
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