Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
Apologies, I should've put all this in 1 message. I just wanted to make
really sure that things are indeed crashing where we think they are:
I reopened Athena, loaded the cyanobacteria.prj again, grabbed the plot log
(no warnings/errors/crashes have appeared in Athena at this point, although
the multi plot window is showing only the first subplot out of 4), put it
in a .plt file on the desktop, opened a gnu plot terminal independently
(from strawberry/c/gnuplot/bin or something like that), loaded the .plt
file, and indeed it chokes on the ranges:
gnuplot> load 'C:\Users\jorissen\Desktop\gnuplot.plt'
"C:\Users\jorissen\Desktop\gnuplot.plt", line 100: Can't plot with
an empty x range!
multiplot>
The full .plt file is:
##
## NEW PLOT
set output
set encoding iso_8859_15
set terminal wxt 1 font 'Arial,8' enhanced dashed title "Athena[Plot.1]"
set origin 0.01,0.01
set size 0.99,0.99
set autoscale
unset label
unset logscale
unset xrange
unset xtics
set xtics
## line styles
w=1
set style line 1 linecolor rgb "blue" linetype 1 linewidth w pointsize 1
pointtype 7
set style line 2 linecolor rgb "red" linetype 1 linewidth w pointsize 1
set style line 3 linecolor rgb "dark-green" linetype 1 linewidth w
pointsize 1
set style line 4 linecolor rgb "dark-violet" linetype 1 linewidth w
pointsize 1
set style line 5 linecolor rgb "yellow4" linetype 1 linewidth w pointsize 1
set style line 6 linecolor rgb "brown" linetype 1 linewidth w pointsize 1
set style line 7 linecolor rgb "dark-pink" linetype 1 linewidth w
pointsize 1
set style line 8 linecolor rgb "gold" linetype 1 linewidth w pointsize 1
set style line 9 linecolor rgb "dark-cyan" linetype 1 linewidth w
pointsize 1
set style line 10 linecolor rgb "spring-green" linetype 1 linewidth w
pointsize 1
## marker styles
set style line 12 linecolor rgb "#EE9A00"
## indicator styles
set style line 16 linecolor rgb "#8F3910" lt 3 lw 1.5
set style arrow 1 nohead ls 16
unset arrow
## plot formatting
set style line 20 linecolor rgb "#cc"
set grid ls 20
set key top right width 1 height 1 box
set label 99 '{/*0.6 Demeter 0.9.19 {\251} Bruce Ravel 2006-2014}' at
screen 0.7, screen 0.02 font 'Arial'
##
## NEW PLOT
set output
set encoding iso_8859_15
set terminal wxt 1 font 'Arial,8' enhanced dashed title "Athena[Plot.1]"
set origin 0.01,0.01
set size 0.99,0.99
set autoscale
unset label
unset logscale
unset xrange
unset xtics
set xtics
## line styles
w=1
set style line 1 linecolor rgb "blue" linetype 1 linewidth w pointsize 1
pointtype 7
set style line 2 linecolor rgb "red" linetype 1 linewidth w pointsize 1
set style line 3 linecolor rgb "dark-green" linetype 1 linewidth w
pointsize 1
set style line 4 linecolor rgb "dark-violet" linetype 1 linewidth w
pointsize 1
set style line 5 linecolor rgb "yellow4" linetype 1 linewidth w pointsize 1
set style line 6 linecolor rgb "brown" linetype 1 linewidth w pointsize 1
set style line 7 linecolor rgb "dark-pink" linetype 1 linewidth w
pointsize 1
set style line 8 linecolor rgb "gold" linetype 1 linewidth w pointsize 1
set style line 9 linecolor rgb "dark-cyan" linetype 1 linewidth w
pointsize 1
set style line 10 linecolor rgb "spring-green" linetype 1 linewidth w
pointsize 1
## marker styles
set style line 12 linecolor rgb "#EE9A00"
## indicator styles
set style line 16 linecolor rgb "#8F3910" lt 3 lw 1.5
set style arrow 1 nohead ls 16
unset arrow
## plot formatting
set style line 20 linecolor rgb "#cc"
set grid ls 20
set key top right width 1 height 1 box
# 0.12: ifeffit group = ozun
set multiplot layout 2,2
unset key
unset label
## energy quadrant
set title "{/*1.6 Energy}"
set xlabel "{/*1.4 Energy&{aa}(eV)}"
set ylabel "{/*1.4 x{/Symbol m}(E)}"
#set xrange [ 11918.952 : 11918.952 ]
plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_nkxkgsoz' using
1:2 with lines ls 2,\
'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_klrzlnbv' using
1:2 with lines ls 1,\
'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_ducluvgs' using
1:2 with lines ls 3,\
'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_mtjutfnz' using
1:2 with lines ls 4
## k quadrant
set title "{/*1.5 k-space}"
set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
set ylabel "{/*1.2 k^{2} {\267} {/Symbol c}(k)&{aa}({\305}^{-2})}"
set xrange [ 0 : 0 ]
plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_rcaunifm' using
1:2 with lines ls 1
## R quadrant
set title "{/*1.5 R-space}"
set xlabel "{/*1.2 Radial distance&{aa}({\305})}"
set ylabel "{/*1.2 {/*1.25 |}{/Symbol c}(R){/*1.25 |}&{aa}({\305}^{-3})}"
set xrange [ 0 : 0 ]
plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_ogmlhgdf' using
1:2 with lines ls 1,\
'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_ginwmqtf' using
1:2 with lines ls 2
## q quadrant
set title "{/*1.5 q-space}"
set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
set ylabel "{/*1.2 {/*1.25 Re[}{/Symbol c}(q){/*1.25 ]}&{aa}({\305}^{-2})}"
set
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
-- just to be clear, the pasted section of the log is not the bottom part.
It is followed by many more lines containing gnu plot settings (but no
"plot" commands).
Cheers,
Kevin
On Tue, Jan 14, 2014 at 5:38 PM, Kevin Jorissen
wrote:
> Out of curiosity, I installed 09.19 on a fresh Win8.1 64bit under VMWare.
> No problems during installation. I opened the cyanobacteria.prj data from
> Bruce's sample data repo in Athena. After clicking around a few times
> (specifically, clicking the green arrow and the magnifying glass+red curve
> next to it in the toolbar of the plot window), I caused a "gnu plot.exe has
> stopped working" error. Going into the monitor for the plotting log, I see
> a similar x-range problem as discovered by Robert Gordon:
>
> ## energy quadrant
>
> set title "{/*1.6 Energy}"
>
> set xlabel "{/*1.4 Energy&{aa}(eV)}"
>
> set ylabel "{/*1.4 x{/Symbol m}(E)}"
>
> #set xrange [ 11918.952 : 11918.952 ]
>
> plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_lydqknai' using
> 1:2 with lines ls 2,\
>
> 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_kpklgmnh' using
> 1:2 with lines ls 1,\
>
> 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_djrhchms' using
> 1:2 with lines ls 3,\
>
> 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_geakjukk' using
> 1:2 with lines ls 4
>
>
> ## k quadrant
>
> set title "{/*1.5 k-space}"
>
> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
>
> set ylabel "{/*1.2 k^{2} {\267} {/Symbol c}(k)&{aa}({\305}^{-2})}"
>
> set xrange [ 0 : 0 ]
>
> plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_vyutwjzc' using
> 1:2 with lines ls 1
>
>
> ## R quadrant
>
> set title "{/*1.5 R-space}"
>
> set xlabel "{/*1.2 Radial distance&{aa}({\305})}"
>
> set ylabel "{/*1.2 {/*1.25 |}{/Symbol c}(R){/*1.25 |}&{aa}({\305}^{-3})}"
>
> set xrange [ 0 : 0 ]
>
> plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_qeqqfnof' using
> 1:2 with lines ls 1,\
>
> 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_njjlolaa' using
> 1:2 with lines ls 2
>
>
> ## q quadrant
>
> set title "{/*1.5 q-space}"
>
> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
>
> set ylabel "{/*1.2 {/*1.25 Re[}{/Symbol c}(q){/*1.25 ]}&{aa}({\305}^{-2})}"
>
> set xrange [ 0 : 0 ]
>
> plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_ydrraees' using
> 1:2 with lines ls 1
>
>
> So, I'm not offering anything new in this message, but perhaps confirming
> someone else's experience can help. To be clear, this VM has never seen
> any kind of Demeter, perl, gnu plot, ... before this experiment. It's a
> clean Windows (I only added java and feff9 on it at an earlier time) and
> current with all windows updates.
>
>
> Cheers,
>
>
> Kevin
>
>
>
>
>
>
> On Tue, Jan 14, 2014 at 2:17 PM, Robert Gordon wrote:
>
>> Installing 0.9.19 overtop of 0.9.18.2 and Athena works fine.
>>
>> Installing 0.9.19 clean (deleting demeter directory under appdata/roaming)
>> 2nd attempt to open file in DAthena results in only 1 mini-graph.
>>
>> Ranges are 0 for Emin/max, kmin/max, Rmin/max - putting a valid range
>> restores
>> full graph e.g. Rmin = 0 , Rmax = 6 gives full-size R-space graph...ditto
>> for fixing other
>> ranges. Fixed 3 out of 4 and read in a new file...obtained 3
>> mini-graphs...reset q range
>> as well and that one appears too.
>>
>> Exited. Restarted. Read in file -
>> Show Command Buffer/Plot Buffer
>> ## energy quadrant
>> set title "{/*1.6 Energy}"
>> set xlabel "{/*1.4 Energy&{aa}(eV)}"
>> set ylabel "{/*1.4 x{/Symbol m}(E)}"
>> #set xrange [ 11870.11617648 : 11870.11617648 ]
>> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_vlxtfjcm' using
>> 1:2 with lines ls 2,\
>> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_tfoziltm' using
>> 1:2 with lines ls 1,\
>> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_fthredqy' using
>> 1:2 with lines ls 3,\
>> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_iebbuian' using
>> 1:2 with lines ls 4
>>
>> ## k quadrant
>> set title "{/*1.5 k-space}"
>> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
>> set ylabel "{/*1.2 k^{2} {\267} {/Symbol c}(k)&{aa}({\305}^{-2})}"
>> set xrange [ 0 : 0 ]
>> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_xizghpwm' using
>> 1:2 with lines ls 1
>>
>> ## R quadrant
>> set title "{/*1.5 R-space}"
>> set xlabel "{/*1.2 Radial distance&{aa}({\305})}"
>> set ylabel "{/*1.2 {/*1.25 |}{/Symbol c}(R){/*1.25 |}&{aa}({\305}^{-3})}"
>> set xrange [ 0 : 0 ]
>> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_nwtxpqxm' using
>> 1:2 with lines ls 1,\
>> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_vysurgrh' using
>> 1:2 with lines ls 2
>>
>> ## q quadrant
>> set title "{/*1.5 q-space}"
>> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
>> set ylabel "{/*1.2 {/*1.25 Re[}{/Symbol c}(q){/*1.25
>> ]}&{aa}({\305}^{-2})}"
>> set xrange [ 0 : 0 ]
>> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_hxroumyr' using
>> 1:2 with lines ls 1
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
Out of curiosity, I installed 09.19 on a fresh Win8.1 64bit under VMWare.
No problems during installation. I opened the cyanobacteria.prj data from
Bruce's sample data repo in Athena. After clicking around a few times
(specifically, clicking the green arrow and the magnifying glass+red curve
next to it in the toolbar of the plot window), I caused a "gnu plot.exe has
stopped working" error. Going into the monitor for the plotting log, I see
a similar x-range problem as discovered by Robert Gordon:
## energy quadrant
set title "{/*1.6 Energy}"
set xlabel "{/*1.4 Energy&{aa}(eV)}"
set ylabel "{/*1.4 x{/Symbol m}(E)}"
#set xrange [ 11918.952 : 11918.952 ]
plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_lydqknai' using
1:2 with lines ls 2,\
'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_kpklgmnh' using
1:2 with lines ls 1,\
'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_djrhchms' using
1:2 with lines ls 3,\
'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_geakjukk' using
1:2 with lines ls 4
## k quadrant
set title "{/*1.5 k-space}"
set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
set ylabel "{/*1.2 k^{2} {\267} {/Symbol c}(k)&{aa}({\305}^{-2})}"
set xrange [ 0 : 0 ]
plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_vyutwjzc' using
1:2 with lines ls 1
## R quadrant
set title "{/*1.5 R-space}"
set xlabel "{/*1.2 Radial distance&{aa}({\305})}"
set ylabel "{/*1.2 {/*1.25 |}{/Symbol c}(R){/*1.25 |}&{aa}({\305}^{-3})}"
set xrange [ 0 : 0 ]
plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_qeqqfnof' using
1:2 with lines ls 1,\
'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_njjlolaa' using
1:2 with lines ls 2
## q quadrant
set title "{/*1.5 q-space}"
set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
set ylabel "{/*1.2 {/*1.25 Re[}{/Symbol c}(q){/*1.25 ]}&{aa}({\305}^{-2})}"
set xrange [ 0 : 0 ]
plot 'C:\Users\jorissen\AppData\Roaming\demeter\stash\gp_ydrraees' using
1:2 with lines ls 1
So, I'm not offering anything new in this message, but perhaps confirming
someone else's experience can help. To be clear, this VM has never seen
any kind of Demeter, perl, gnu plot, ... before this experiment. It's a
clean Windows (I only added java and feff9 on it at an earlier time) and
current with all windows updates.
Cheers,
Kevin
On Tue, Jan 14, 2014 at 2:17 PM, Robert Gordon wrote:
> Installing 0.9.19 overtop of 0.9.18.2 and Athena works fine.
>
> Installing 0.9.19 clean (deleting demeter directory under appdata/roaming)
> 2nd attempt to open file in DAthena results in only 1 mini-graph.
>
> Ranges are 0 for Emin/max, kmin/max, Rmin/max - putting a valid range
> restores
> full graph e.g. Rmin = 0 , Rmax = 6 gives full-size R-space graph...ditto
> for fixing other
> ranges. Fixed 3 out of 4 and read in a new file...obtained 3
> mini-graphs...reset q range
> as well and that one appears too.
>
> Exited. Restarted. Read in file -
> Show Command Buffer/Plot Buffer
> ## energy quadrant
> set title "{/*1.6 Energy}"
> set xlabel "{/*1.4 Energy&{aa}(eV)}"
> set ylabel "{/*1.4 x{/Symbol m}(E)}"
> #set xrange [ 11870.11617648 : 11870.11617648 ]
> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_vlxtfjcm' using
> 1:2 with lines ls 2,\
> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_tfoziltm' using
> 1:2 with lines ls 1,\
> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_fthredqy' using
> 1:2 with lines ls 3,\
> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_iebbuian' using
> 1:2 with lines ls 4
>
> ## k quadrant
> set title "{/*1.5 k-space}"
> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
> set ylabel "{/*1.2 k^{2} {\267} {/Symbol c}(k)&{aa}({\305}^{-2})}"
> set xrange [ 0 : 0 ]
> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_xizghpwm' using
> 1:2 with lines ls 1
>
> ## R quadrant
> set title "{/*1.5 R-space}"
> set xlabel "{/*1.2 Radial distance&{aa}({\305})}"
> set ylabel "{/*1.2 {/*1.25 |}{/Symbol c}(R){/*1.25 |}&{aa}({\305}^{-3})}"
> set xrange [ 0 : 0 ]
> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_nwtxpqxm' using
> 1:2 with lines ls 1,\
> 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_vysurgrh' using
> 1:2 with lines ls 2
>
> ## q quadrant
> set title "{/*1.5 q-space}"
> set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
> set ylabel "{/*1.2 {/*1.25 Re[}{/Symbol c}(q){/*1.25 ]}&{aa}({\305}^{-2})}"
> set xrange [ 0 : 0 ]
> plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_hxroumyr' using
> 1:2 with lines ls 1
>
> unset multiplot
>
>
>
> So, seems to be setting the xranges to zero for a clean install these
> plots, and gnuplot
> doesn't plot if no xrange. If I reset, then I can move around and use
> DAthena 9.19
> without issue...DArtemis is still an unhappy DHuntress with fpj files...
>
>
>
> On 1/14/2014 3:28 PM, Bruce Ravel wrote:
>
>> On 01/14/2014 04:11 PM, Robert Gordon wrote:
>>
>>> Hi Matt, Shoaib (and Bruce lurking in the luminiferous e
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
On 01/14/2014 05:17 PM, Robert Gordon wrote: Installing 0.9.19 overtop of 0.9.18.2 and Athena works fine. Installing 0.9.19 clean (deleting demeter directory under appdata/roaming) 2nd attempt to open file in DAthena results in only 1 mini-graph. Ranges are 0 for Emin/max, kmin/max, Rmin/max - putting a valid range restores full graph e.g. Rmin = 0 , Rmax = 6 gives full-size R-space graph...ditto for fixing other ranges. Fixed 3 out of 4 and read in a new file...obtained 3 mini-graphs...reset q range as well and that one appears too. Thank you Robert. This is very helpful information. B -- Bruce Ravel bra...@bnl.gov National Institute of Standards and Technology Synchrotron Science Group at NSLS --- Beamlines U7A, X24A, X23A2 Building 535A Upton NY, 11973 Homepage:http://xafs.org/BruceRavel Software:https://github.com/bruceravel ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
Installing 0.9.19 overtop of 0.9.18.2 and Athena works fine.
Installing 0.9.19 clean (deleting demeter directory under appdata/roaming)
2nd attempt to open file in DAthena results in only 1 mini-graph.
Ranges are 0 for Emin/max, kmin/max, Rmin/max - putting a valid range
restores
full graph e.g. Rmin = 0 , Rmax = 6 gives full-size R-space
graph...ditto for fixing other
ranges. Fixed 3 out of 4 and read in a new file...obtained 3
mini-graphs...reset q range
as well and that one appears too.
Exited. Restarted. Read in file -
Show Command Buffer/Plot Buffer
## energy quadrant
set title "{/*1.6 Energy}"
set xlabel "{/*1.4 Energy&{aa}(eV)}"
set ylabel "{/*1.4 x{/Symbol m}(E)}"
#set xrange [ 11870.11617648 : 11870.11617648 ]
plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_vlxtfjcm' using
1:2 with lines ls 2,\
'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_tfoziltm'
using 1:2 with lines ls 1,\
'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_fthredqy'
using 1:2 with lines ls 3,\
'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_iebbuian'
using 1:2 with lines ls 4
## k quadrant
set title "{/*1.5 k-space}"
set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
set ylabel "{/*1.2 k^{2} {\267} {/Symbol c}(k)&{aa}({\305}^{-2})}"
set xrange [ 0 : 0 ]
plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_xizghpwm' using
1:2 with lines ls 1
## R quadrant
set title "{/*1.5 R-space}"
set xlabel "{/*1.2 Radial distance&{aa}({\305})}"
set ylabel "{/*1.2 {/*1.25 |}{/Symbol c}(R){/*1.25 |}&{aa}({\305}^{-3})}"
set xrange [ 0 : 0 ]
plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_nwtxpqxm' using
1:2 with lines ls 1,\
'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_vysurgrh'
using 1:2 with lines ls 2
## q quadrant
set title "{/*1.5 q-space}"
set xlabel "{/*1.2 Wavenumber&{aa}({\305}^{-1})}"
set ylabel "{/*1.2 {/*1.25 Re[}{/Symbol c}(q){/*1.25 ]}&{aa}({\305}^{-2})}"
set xrange [ 0 : 0 ]
plot 'C:\Users\ragordon\AppData\Roaming\demeter\stash\gp_hxroumyr' using
1:2 with lines ls 1
unset multiplot
So, seems to be setting the xranges to zero for a clean install these
plots, and gnuplot
doesn't plot if no xrange. If I reset, then I can move around and use
DAthena 9.19
without issue...DArtemis is still an unhappy DHuntress with fpj files...
On 1/14/2014 3:28 PM, Bruce Ravel wrote:
On 01/14/2014 04:11 PM, Robert Gordon wrote:
Hi Matt, Shoaib (and Bruce lurking in the luminiferous ether),
I have 8.1 x64 on my laptop and just upgraded to 0.9.19 - clean install.
I can offer some additional details on this problem.
I read in a file in DAthena, extracted the chi(k) and saved the project.
All buttons worked. When the file was read in, 4 mini-graphs displayed,
and I could select k, E, R as desired for full graph.
The second time I run it, reading in the exact same file, only the
energy mini-graph
displays and the E,k and R buttons no longer produce any graphs.
From the clean install, I saved the DAthena.prj. I started DArtemis,
read in the DAthena.prj
file, haven't tried fitting but saved the DArtemis fpj file.
If I try re-opening the fpj file I just saved in DArtemis, DArtemis
crashes,
but re-opening the DAthena prj file after starting DArtemis is not a
problem.
In DAthena, if I go to the appdata/roaming/demeter directory and delete
the demeter.ini file,
DAthena will display all 4 mini-graphs when I open the prj file and the
k,R,E buttons work.
Robert,
If you are inclined to help me with some troubleshooting, I have a
request.
If you can recreate the situation where only the energy part of the
quad plot is displayed and the plot buttons stop working, could you
tell me a couple things:
1. What are the values for the plotting ranges in E, k, R, and q?
The reason I ask is that I stumbled upon a situation where Emin,
Emax, kmin, etc all got set to zero (as did a bunch of other
parameters). I could not figure out how to reproduce that
problem, but it would be helpful to know if it happened to
someone else.
2. In the Monitor menu, click on "Show command buffer". In the
"Plot buffer" at the bottom of the window scroll up just a little
bit to where you'll see lines that say things like
plot '/home/bruce/.horae/stash/gp_vdnzxmxl' using 1:2 with
lines ls 1,\
'/home/bruce/.horae/stash/gp_wfaastqg' using 1:2 with
lines ls 2
What I want to know is if the 8 random characters after
"stash/gp_" are the same or different (as in my example here).
In short, I want to know if you have seen some problems I have
observed by not been able to reproduce.
0.9.19 does not appear to be one of my better packaging efforts, alas.
B
I uninstalled and went back to 0.9.18.2. DAthena seems to work - all 4
mini-graphs, and E,k,R work.
DArtemis still opens, reads DAthena.prj but crashes when trying to read
fpj file created under 0.9.18.2.
Going back to the last 0.8.0nn versions, no crashes from Artemi
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
On 01/14/2014 04:11 PM, Robert Gordon wrote: Hi Matt, Shoaib (and Bruce lurking in the luminiferous ether), I have 8.1 x64 on my laptop and just upgraded to 0.9.19 - clean install. I can offer some additional details on this problem. I read in a file in DAthena, extracted the chi(k) and saved the project. All buttons worked. When the file was read in, 4 mini-graphs displayed, and I could select k, E, R as desired for full graph. The second time I run it, reading in the exact same file, only the energy mini-graph displays and the E,k and R buttons no longer produce any graphs. From the clean install, I saved the DAthena.prj. I started DArtemis, read in the DAthena.prj file, haven't tried fitting but saved the DArtemis fpj file. If I try re-opening the fpj file I just saved in DArtemis, DArtemis crashes, but re-opening the DAthena prj file after starting DArtemis is not a problem. In DAthena, if I go to the appdata/roaming/demeter directory and delete the demeter.ini file, DAthena will display all 4 mini-graphs when I open the prj file and the k,R,E buttons work. Robert, If you are inclined to help me with some troubleshooting, I have a request. If you can recreate the situation where only the energy part of the quad plot is displayed and the plot buttons stop working, could you tell me a couple things: 1. What are the values for the plotting ranges in E, k, R, and q? The reason I ask is that I stumbled upon a situation where Emin, Emax, kmin, etc all got set to zero (as did a bunch of other parameters). I could not figure out how to reproduce that problem, but it would be helpful to know if it happened to someone else. 2. In the Monitor menu, click on "Show command buffer". In the "Plot buffer" at the bottom of the window scroll up just a little bit to where you'll see lines that say things like plot '/home/bruce/.horae/stash/gp_vdnzxmxl' using 1:2 with lines ls 1,\ '/home/bruce/.horae/stash/gp_wfaastqg' using 1:2 with lines ls 2 What I want to know is if the 8 random characters after "stash/gp_" are the same or different (as in my example here). In short, I want to know if you have seen some problems I have observed by not been able to reproduce. 0.9.19 does not appear to be one of my better packaging efforts, alas. B I uninstalled and went back to 0.9.18.2. DAthena seems to work - all 4 mini-graphs, and E,k,R work. DArtemis still opens, reads DAthena.prj but crashes when trying to read fpj file created under 0.9.18.2. Going back to the last 0.8.0nn versions, no crashes from Artemis or Athena. Hope this helps. -R. On 1/14/2014 12:38 PM, Matt Newville wrote: Hi Shoaib, On Tue, Jan 14, 2014 at 10:46 AM, Shoaib Muhammad wrote: Hi, I have recently upgraded my computer to Windows 8.1 Pro x64 and after this upgrade I can’t run Athena and Artemis. The problem symptoms are: 1- If I use Demeter version 0.9.13, Athena opens but when I try to open previously saved file, Athena simply crashes without showing any error. Artemis also shows similar behavior. 2- By using latest build Demeter 0.9.19, Athena behavior is slightly different it opens the files and show the plot. But pressing the E,k,R buttons does not change the plot. Artemis still crashes by opening any project file without any error. I have tried following things, installed in compatibility mode of Windows7. Athena worked fine only once after installing in compatibility mode. Installed in different drives but situations remains the same. Tried to “run as Admin” but no improvement. Installed Demeter on three different computers running Windows 8.1 x64 but similar behavior is received. Kindly suggest me some work around because I have to use Demeter on almost daily basis. I have attached log file obtained from Demeter 0.9.13 running under Window 8.1 x64. Thanks, Shoaib Muhammad Department of Energy Science Sungkyunkwan University South Korea ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit I think you might be in mostly uncharted waters with 64-bit Windows 8. I have access to many Windows machines, but I don't know of any 64-bit Windows 8.1 machines in our group. If you're up for it, it might be worth installing demeter from source from the github repository, following http://bruceravel.github.io/demeter/pods/installation.pod.html and asking for help if you get stuck. I'm sure it would be a great help to others if you did this --Matt ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit -- Bruce Ravel bra...@bnl.gov National Institute of Standards and Technology Synchrotron Science Group at NSLS --- Beamlines U7A, X24A, X23A2 Building 535A Upton
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
On 01/14/2014 04:21 PM, Bruce Ravel wrote: The log files you attached are reporting a problem that was corrected in 0.9.18. The updater to bring 0.9.13 up to 0.9.18 is available at the bottom of the page at http://bruceravel.github.io/demeter/ I should stress that it is not necessary to apply the updates in sequence. You can install the 0.9.18 update on top of 0.9.13. B -- Bruce Ravel bra...@bnl.gov National Institute of Standards and Technology Synchrotron Science Group at NSLS --- Beamlines U7A, X24A, X23A2 Building 535A Upton NY, 11973 Homepage:http://xafs.org/BruceRavel Software:https://github.com/bruceravel ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
On 01/14/2014 11:46 AM, Shoaib Muhammad wrote: Hi, I have recently upgraded my computer to Windows 8.1 Pro x64 and after this upgrade I can’t run Athena and Artemis. The problem symptoms are: 1-If I use Demeter version 0.9.13, Athena opens but when I try to open previously saved file, Athena simply crashes without showing any error. Artemis also shows similar behavior. 2-By using latest build Demeter 0.9.19, Athena behavior is slightly different it opens the files and show the plot. But pressing the E,k,R buttons does not change the plot. Artemis still crashes by opening any project file without any error. I have tried following things, installed in compatibility mode of Windows7. Athena worked fine only once after installing in compatibility mode. Installed in different drives but situations remains the same. Tried to “run as Admin” but no improvement. Installed Demeter on three different computers running Windows 8.1 x64 but similar behavior is received. Kindly suggest me some work around because I have to use Demeter on almost daily basis. I have attached log file obtained from Demeter 0.9.13 running under Window 8.1 x64. Hi Shoaib, I am sorry this is so frustrating for you. I share your pain. I only have access to a limited number of platforms. I try hard to make a quality release that will work for many people, but the simple truth is that my testing resources are limited. You are actually reporting two problems. The log files you attached are reporting a problem that was corrected in 0.9.18. The updater to bring 0.9.13 up to 0.9.18 is available at the bottom of the page at http://bruceravel.github.io/demeter/ You simply cannot step back to 0.9.13 if you have used 0.9.18 and expect to be able to read athena project files coming from the later version. That was a painful change to the code, but a necessary one. As for the problems with the new release, you are the second person to report problems. Georges Siddiqi has very kindly been helping me track down the problems, but so far to no avail. I am suspicious that I may have neglected to include some important file in the new installer package. Without the log file that gets written by the crashing athena or artemis, there is nothing I can do to troubleshoot. I am seeing none of these problems on any of my own computers, although I do not have a Win8 machine at my disposal. B -- Bruce Ravel bra...@bnl.gov National Institute of Standards and Technology Synchrotron Science Group at NSLS --- Beamlines U7A, X24A, X23A2 Building 535A Upton NY, 11973 Homepage:http://xafs.org/BruceRavel Software:https://github.com/bruceravel ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
Hi Matt, Shoaib (and Bruce lurking in the luminiferous ether), I have 8.1 x64 on my laptop and just upgraded to 0.9.19 - clean install. I can offer some additional details on this problem. I read in a file in DAthena, extracted the chi(k) and saved the project. All buttons worked. When the file was read in, 4 mini-graphs displayed, and I could select k, E, R as desired for full graph. The second time I run it, reading in the exact same file, only the energy mini-graph displays and the E,k and R buttons no longer produce any graphs. From the clean install, I saved the DAthena.prj. I started DArtemis, read in the DAthena.prj file, haven't tried fitting but saved the DArtemis fpj file. If I try re-opening the fpj file I just saved in DArtemis, DArtemis crashes, but re-opening the DAthena prj file after starting DArtemis is not a problem. In DAthena, if I go to the appdata/roaming/demeter directory and delete the demeter.ini file, DAthena will display all 4 mini-graphs when I open the prj file and the k,R,E buttons work. I uninstalled and went back to 0.9.18.2. DAthena seems to work - all 4 mini-graphs, and E,k,R work. DArtemis still opens, reads DAthena.prj but crashes when trying to read fpj file created under 0.9.18.2. Going back to the last 0.8.0nn versions, no crashes from Artemis or Athena. Hope this helps. -R. On 1/14/2014 12:38 PM, Matt Newville wrote: Hi Shoaib, On Tue, Jan 14, 2014 at 10:46 AM, Shoaib Muhammad wrote: Hi, I have recently upgraded my computer to Windows 8.1 Pro x64 and after this upgrade I can’t run Athena and Artemis. The problem symptoms are: 1- If I use Demeter version 0.9.13, Athena opens but when I try to open previously saved file, Athena simply crashes without showing any error. Artemis also shows similar behavior. 2- By using latest build Demeter 0.9.19, Athena behavior is slightly different it opens the files and show the plot. But pressing the E,k,R buttons does not change the plot. Artemis still crashes by opening any project file without any error. I have tried following things, installed in compatibility mode of Windows7. Athena worked fine only once after installing in compatibility mode. Installed in different drives but situations remains the same. Tried to “run as Admin” but no improvement. Installed Demeter on three different computers running Windows 8.1 x64 but similar behavior is received. Kindly suggest me some work around because I have to use Demeter on almost daily basis. I have attached log file obtained from Demeter 0.9.13 running under Window 8.1 x64. Thanks, Shoaib Muhammad Department of Energy Science Sungkyunkwan University South Korea ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit I think you might be in mostly uncharted waters with 64-bit Windows 8. I have access to many Windows machines, but I don't know of any 64-bit Windows 8.1 machines in our group. If you're up for it, it might be worth installing demeter from source from the github repository, following http://bruceravel.github.io/demeter/pods/installation.pod.html and asking for help if you get stuck. I'm sure it would be a great help to others if you did this --Matt ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit -- Dr. Robert Gordon Staff Scientist, PNCSRF APS Sector 20 (PNC/XSD) 9700 S Cass Ave. 435E Argonne, IL, USA 60439 630-252-0581 630-252-0580 fax ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
Hi Shoaib, On Tue, Jan 14, 2014 at 10:46 AM, Shoaib Muhammad wrote: > Hi, > > > > I have recently upgraded my computer to Windows 8.1 Pro x64 and after this > upgrade I can’t run Athena and Artemis. The problem symptoms are: > > > > 1- If I use Demeter version 0.9.13, Athena opens but when I try to open > previously saved file, Athena simply crashes without showing any error. > Artemis also shows similar behavior. > > 2- By using latest build Demeter 0.9.19, Athena behavior is slightly > different it opens the files and show the plot. But pressing the E,k,R > buttons does not change the plot. Artemis still crashes by opening any > project file without any error. > > > > I have tried following things, installed in compatibility mode of Windows7. > Athena worked fine only once after installing in compatibility mode. > > Installed in different drives but situations remains the same. Tried to “run > as Admin” but no improvement. > > Installed Demeter on three different computers running Windows 8.1 x64 but > similar behavior is received. > > > > Kindly suggest me some work around because I have to use Demeter on almost > daily basis. I have attached log file obtained from Demeter 0.9.13 running > under Window 8.1 x64. > > > > Thanks, > > Shoaib Muhammad > > Department of Energy Science > > Sungkyunkwan University > > South Korea > > > ___ > Ifeffit mailing list > Ifeffit@millenia.cars.aps.anl.gov > http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit > I think you might be in mostly uncharted waters with 64-bit Windows 8. I have access to many Windows machines, but I don't know of any 64-bit Windows 8.1 machines in our group. If you're up for it, it might be worth installing demeter from source from the github repository, following http://bruceravel.github.io/demeter/pods/installation.pod.html and asking for help if you get stuck. I'm sure it would be a great help to others if you did this --Matt ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
Thanks Christopher for your kind reply, Actually, virtualbox or alternative OS would be my last resort in case I could not solve this issue. I would prefer to somehow solve this issue under Windows8 x64 to keep my system simple and take maximum advantage of updated hardware. Thanks, /Shoaib From: ifeffit-boun...@millenia.cars.aps.anl.gov [mailto:ifeffit-boun...@millenia.cars.aps.anl.gov] On Behalf Of Chris Patridge Sent: Wednesday, January 15, 2014 2:30 AM To: XAFS Analysis using Ifeffit Subject: Re: [Ifeffit] Demeter not working on Windows 8.1 64bit Shoaib, Do you have any experience with virtual machines? You could run it on a stable earlier version of Windows that you previous used before upgrading. Virtualbox and Linux would completely free and you could probably be up and running in less than an hour. Just a thought, Chris *** Dr. Christopher Patridge Assistant Professor Department of Math and Natural Sciences D'youville College Contact: 315-529-0501 On Jan 14, 2014, at 11:46 AM, "Shoaib Muhammad" mailto:mshoai...@gmail.com> > wrote: Hi, I have recently upgraded my computer to Windows 8.1 Pro x64 and after this upgrade I can't run Athena and Artemis. The problem symptoms are: 1- If I use Demeter version 0.9.13, Athena opens but when I try to open previously saved file, Athena simply crashes without showing any error. Artemis also shows similar behavior. 2- By using latest build Demeter 0.9.19, Athena behavior is slightly different it opens the files and show the plot. But pressing the E,k,R buttons does not change the plot. Artemis still crashes by opening any project file without any error. I have tried following things, installed in compatibility mode of Windows7. Athena worked fine only once after installing in compatibility mode. Installed in different drives but situations remains the same. Tried to "run as Admin" but no improvement. Installed Demeter on three different computers running Windows 8.1 x64 but similar behavior is received. Kindly suggest me some work around because I have to use Demeter on almost daily basis. I have attached log file obtained from Demeter 0.9.13 running under Window 8.1 x64. Thanks, Shoaib Muhammad Department of Energy Science Sungkyunkwan University South Korea ___ Ifeffit mailing list <mailto:Ifeffit@millenia.cars.aps.anl.gov> Ifeffit@millenia.cars.aps.anl.gov <http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
Re: [Ifeffit] Demeter not working on Windows 8.1 64bit
Shoaib, Do you have any experience with virtual machines? You could run it on a stable earlier version of Windows that you previous used before upgrading. Virtualbox and Linux would completely free and you could probably be up and running in less than an hour. Just a thought, Chris *** Dr. Christopher Patridge Assistant Professor Department of Math and Natural Sciences D'youville College Contact: 315-529-0501 On Jan 14, 2014, at 11:46 AM, "Shoaib Muhammad" wrote: > Hi, > > I have recently upgraded my computer to Windows 8.1 Pro x64 and after this > upgrade I can’t run Athena and Artemis. The problem symptoms are: > > 1- If I use Demeter version 0.9.13, Athena opens but when I try to open > previously saved file, Athena simply crashes without showing any error. > Artemis also shows similar behavior. > 2- By using latest build Demeter 0.9.19, Athena behavior is slightly > different it opens the files and show the plot. But pressing the E,k,R > buttons does not change the plot. Artemis still crashes by opening any > project file without any error. > > I have tried following things, installed in compatibility mode of Windows7. > Athena worked fine only once after installing in compatibility mode. > Installed in different drives but situations remains the same. Tried to “run > as Admin” but no improvement. > Installed Demeter on three different computers running Windows 8.1 x64 but > similar behavior is received. > > Kindly suggest me some work around because I have to use Demeter on almost > daily basis. I have attached log file obtained from Demeter 0.9.13 running > under Window 8.1 x64. > > Thanks, > Shoaib Muhammad > Department of Energy Science > Sungkyunkwan University > South Korea > ___ > Ifeffit mailing list > Ifeffit@millenia.cars.aps.anl.gov > http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
[Ifeffit] Demeter not working on Windows 8.1 64bit
Hi, I have recently upgraded my computer to Windows 8.1 Pro x64 and after this upgrade I can't run Athena and Artemis. The problem symptoms are: 1- If I use Demeter version 0.9.13, Athena opens but when I try to open previously saved file, Athena simply crashes without showing any error. Artemis also shows similar behavior. 2- By using latest build Demeter 0.9.19, Athena behavior is slightly different it opens the files and show the plot. But pressing the E,k,R buttons does not change the plot. Artemis still crashes by opening any project file without any error. I have tried following things, installed in compatibility mode of Windows7. Athena worked fine only once after installing in compatibility mode. Installed in different drives but situations remains the same. Tried to "run as Admin" but no improvement. Installed Demeter on three different computers running Windows 8.1 x64 but similar behavior is received. Kindly suggest me some work around because I have to use Demeter on almost daily basis. I have attached log file obtained from Demeter 0.9.13 running under Window 8.1 x64. Thanks, Shoaib Muhammad Department of Energy Science Sungkyunkwan University South Korea dartemis.log Description: Binary data dathena.log Description: Binary data ___ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
