Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-17 Thread Robert Hanson
-users@lists.sourceforge.net Gesendet: Dienstag, 10. August 2010 14:48:50 Betreff: Re: [Jmol-users] change the visible part of an isosurface without reloading On Tue, Aug 10, 2010 at 7:33 AM, Alexander Rose alexander.r...@weirdbyte.de wrote: It's certainly an interesting idea, though

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-17 Thread Alexander Rose
Hi, Am 17.08.2010 um 08:10 schrieb Robert Hanson: Alex, you can't use the ready function to send scripts to the applet -- 3 seconds or whatever. The ready function can fire well before the applet is loaded. Of course, I agree, but after caching the applet that shouldn't happen on a

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-17 Thread Robert Hanson
Ooooh -- seems to work great now, though transferring the files is a bit slow. Very cool! I'll track down that hourglass issue. On Tue, Aug 17, 2010 at 4:09 AM, Alexander Rose alexander.r...@weirdbyte.de wrote: Hi, Am 17.08.2010 um 08:10 schrieb Robert Hanson: Alex, you can't use the

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-16 Thread Alexander Rose
Hi, Am 11.08.2010 um 17:51 schrieb Robert Hanson: I think you mean that you want to be able to set the cutoff or sigma value on the fly. you're right That's not going to happen. Jmol doesn't save the entire cube file or map data -- and doesn't generally have the memory available

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-16 Thread Alexander Rose
Hi, - Ursprüngliche Mail - Von: Robert Hanson hans...@stolaf.edu An: jmol-users@lists.sourceforge.net Gesendet: Dienstag, 10. August 2010 14:48:50 Betreff: Re: [Jmol-users] change the visible part of an isosurface without reloading On Tue, Aug 10, 2010 at 7:33 AM, Alexander Rose

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-16 Thread Jeff Hansen
, 2010, at 12:14 PM, Alexander Rose wrote: Hi, - Ursprüngliche Mail - Von: Robert Hanson hans...@stolaf.edu An: jmol-users@lists.sourceforge.net Gesendet: Dienstag, 10. August 2010 14:48:50 Betreff: Re: [Jmol-users] change the visible part of an isosurface without reloading On Tue

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-16 Thread Alexander Rose
] change the visible part of an isosurface without reloading On Tue, Aug 10, 2010 at 7:33 AM, Alexander Rose alexander.r...@weirdbyte.de wrote: It's certainly an interesting idea, though. Sort of a hide selected triangles option, I think. Hmm. We have: isosurface ID foo show isosurface ID

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-16 Thread Jeff Hansen
Gesendet: Dienstag, 10. August 2010 14:48:50 Betreff: Re: [Jmol-users] change the visible part of an isosurface without reloading On Tue, Aug 10, 2010 at 7:33 AM, Alexander Rose alexander.r...@weirdbyte.de wrote: It's certainly an interesting idea, though. Sort of a hide selected triangles

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-16 Thread Alexander Rose
*** On Aug 16, 2010, at 12:14 PM, Alexander Rose wrote: Hi, - Ursprüngliche Mail - Von: Robert Hanson hans...@stolaf.edu An: jmol-users@lists.sourceforge.net Gesendet: Dienstag, 10. August 2010 14:48:50 Betreff: Re: [Jmol-users] change the visible part of an isosurface

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-11 Thread Robert Hanson
2010 15:53:10 Betreff: Re: [Jmol-users] change the visible part of an isosurface without reloading Hi, - Ursprüngliche Mail - Von: Robert Hanson hans...@stolaf.edu An: jmol-users@lists.sourceforge.net Gesendet: Dienstag, 10. August 2010 14:48:50 Betreff: Re: [Jmol-users

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-11 Thread Robert Hanson
- Ursprüngliche Mail - Von: Alexander Rose alexander.r...@weirdbyte.de An: jmol-users@lists.sourceforge.net Gesendet: Dienstag, 10. August 2010 15:53:10 Betreff: Re: [Jmol-users] change the visible part of an isosurface without reloading Hi, - Ursprüngliche Mail - Von: Robert

[Jmol-users] change the visible part of an isosurface without reloading

2010-08-10 Thread Alexander Rose
Hi all, I've been playing around with the isosurface command to view ccp4 maps. There are a lot of things which work very nicely: isosurface ID foo color black Test.ccp4 mesh nofill # load a ccp4 map isosurface ID foo noMesh Dots # change the from mesh to dot representation color $foo green #

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-10 Thread Robert Hanson
On Tue, Aug 10, 2010 at 7:33 AM, Alexander Rose alexander.r...@weirdbyte.de wrote: Hi all, It seems though that the last command does not work on an existing map: isosurface ID foo within 2.0 {atomNo100} # doesn't work That's right. The WITHIN option is only for map creation, not map

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-10 Thread Alexander Rose
Hi, - Ursprüngliche Mail - Von: Robert Hanson hans...@stolaf.edu An: jmol-users@lists.sourceforge.net Gesendet: Dienstag, 10. August 2010 14:48:50 Betreff: Re: [Jmol-users] change the visible part of an isosurface without reloading On Tue, Aug 10, 2010 at 7:33 AM, Alexander Rose

Re: [Jmol-users] change the visible part of an isosurface without reloading

2010-08-10 Thread Alexander Rose
alexander.r...@weirdbyte.de An: jmol-users@lists.sourceforge.net Gesendet: Dienstag, 10. August 2010 15:53:10 Betreff: Re: [Jmol-users] change the visible part of an isosurface without reloading Hi, - Ursprüngliche Mail - Von: Robert Hanson hans...@stolaf.edu An: jmol-users