Hello Pymol community,
I'm experiencing a problem when colouring a pdb by secondary
structure. The colour bleeds from the ends of helices and sheets into
loop.
for example, if I were to
color orange, a/49:52/
color purple, a/53:55/
color mred2, a/56:59/
where a/49:52/ is beta strand
Hello,
* cami...@mrc-lmb.cam.ac.uk cami...@mrc-lmb.cam.ac.uk [2003-04-29 14:08]
wrote:
Hello Pymol community,
I'm experiencing a problem when colouring a pdb by secondary
structure. The colour bleeds from the ends of helices and sheets into
loop.
for example, if I were to
Hi,
Anybody know what this message is caused by?
[chem05:~] grayt% pymol
Traceback (most recent call last):
File /sw/lib/pymol/modules/pymol/__init__.py, line 59, in ?
import threading
File /sw/lib/python2.2/threading.py, line 4, in ?
import time
ImportError: No module
Dear all,
This has probably been asked a thousand times, but is the default
surface representation a molecular surface or a solvent accessible
surface?
Thanks in advance,
Dennis
On Wednesday, Apr 30, 2003, at 05:38 Australia/Sydney, Terry M. Gray
wrote:
Hi,
Anybody know what this message is caused by?
Yep :) I have seen this a couple times before, do you have a
'sw/lib/python2.2/lib-dynload/time.so' if you don't do a 'fink rebuild
python22' even if it is there
Anybody know what this message is caused by?
Yep :) I have seen this a couple times before, do you have a
'sw/lib/python2.2/lib-dynload/time.so' if you don't do a 'fink
rebuild python22' even if it is there still do a 'fink rebuild
python22' a rebuilding of python always seems to fix it.
Hi,
Anybody know what this message is caused by?
[chem05:~] grayt% pymol
Traceback (most recent call last):
File /sw/lib/pymol/modules/pymol/__init__.py, line 59, in ?
import threading
File /sw/lib/python2.2/threading.py, line 4, in ?
import time
ImportError: No
Warren's script is not quite right. The value -0.902 is not correct.
Apparently, my picture, with a stick peptide casting a shadow on the inner
surface of a deep crevice, is particularly demanding.
I have done the vector calculations. See the attached excel worksheet for
light vectors for
