Re: [Rdkit-discuss] RDKIT installation issue on Centos 5.6

2012-07-27 Thread Greg Landrum
Thanks for the info Fabian. I'm CC'ing the mailing list so that others see it as well. -greg On Fri, Jul 27, 2012 at 8:40 AM, Fabian Dey fabian...@gmail.com wrote: Dear all, I got RDKit working after some more trials using python2.7 - using an installed version of python (2.6) always led

Re: [Rdkit-discuss] RDKIT installation issue on Centos 5.6

2012-07-20 Thread Greg Landrum
Hi Fabian, On Thu, Jul 19, 2012 at 8:28 AM, Fabian Dey fabian...@hotmail.com wrote: Dear all, and at test 44 - it basically freezes (Start 44: pyPartialCharges). If I start python (2.4) and try to import rdkit it crashes with a seg-fault, in python2.6 I get: from rdkit import Chem

[Rdkit-discuss] RDKIT installation issue on Centos 5.6

2012-07-19 Thread Fabian Dey
Dear all, I am having difficulties installing RDKIT on a Centos 5.6 (with python bindings). I compiled and installed the latest numpy, boost and cmake version from their sources (I had also tried using the versions available through yum - which are quite old compared to the most

Re: [Rdkit-discuss] RDKIT installation issue on Centos 5.6

2012-07-19 Thread Paul Emsley
On 19/07/12 13:28, Fabian Dey wrote: Dear all, I am having difficulties installing RDKIT on a Centos 5.6 (with python bindings). I compiled and installed the latest numpy, boost and cmake version from their sources (I had also tried using the versions available through yum - which are

Re: [Rdkit-discuss] RDKIT installation issue on Centos 5.6

2012-07-19 Thread JP
On 19 July 2012 14:56, Paul Emsley paul.ems...@bioch.ox.ac.uk wrote: On 19/07/12 13:28, Fabian Dey wrote: I am having difficulties installing RDKIT on a Centos 5.6 (with python bindings). Who hasn't? I have installed RDKit on centos 5.0 and 5.1 and it wasn't a pleasure filled

Re: [Rdkit-discuss] RDKIT installation issue on Centos 5.6

2012-07-19 Thread Gianluca Sforna
On Thu, Jul 19, 2012 at 4:32 PM, JP jeanpaul.ebe...@inhibox.com wrote: Who hasn't? I have installed RDKit on centos 5.0 and 5.1 and it wasn't a pleasure filled experience mostly due to the outdated (prehistoric, rather) packages. But they weren't at release time :) If you pick any release of