Re: [Wien] parallel ssh error

2019-09-30 Thread Gavin Abo
Good to see.  As you know, "hup: Command not found" can be ignored: http://zeus.theochem.tuwien.ac.at/pipermail/wien/2011-April/014484.html http://zeus.theochem.tuwien.ac.at/pipermail/wien/2010-September/013598.html https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg11131.html On

Re: [Wien] parallel ssh error

2019-09-30 Thread Indranil mal
Thank you Sir for your instantaneous support. Now it is working smoothly only with hup: Command not found. On Sun, Sep 29, 2019 at 6:32 PM Gavin Abo wrote: > Checking with "which lapw1c" on each node (vlsi1, vlsi2, vlsi3, and vlsi4) > is a good idea. However, since WIENROOT is (blank) [1],

Re: [Wien] parallel ssh error

2019-09-30 Thread Gavin Abo
An additional comment, /home/username/WIEN2k (or ~/WIEN2k) is where I have WIEN2k installed.  Whereas, you have installed WIEN2k at /servernode1 [1].  In the examples of my previous posts (e.g. [2]) you might find some typographical errors were I forget to replace my /home/username/WIEN2k with

Re: [Wien] parallel ssh error

2019-09-30 Thread Peter Blaha
So there is progress as now the environment seems to be accepted in the remote shell. lapw1para (called by x_lapw, which is called by run_lapw -p) creates the splitted klists-files (case.klist_1,...) and def files lapw1_1.def,... It uses the $cwd variable and executes basically: ssh vlsi1

Re: [Wien] parallel ssh error

2019-09-29 Thread Gavin Abo
Checking with "which lapw1c" on each node (vlsi1, vlsi2, vlsi3, and vlsi4) is a good idea.  However, since WIENROOT is (blank) [1], it probably won't work until that is resolved. It was mentioned that the WIEN2k .bashrc block was setup on each node by running userconfig [2]. So it definitely

Re: [Wien] parallel ssh error

2019-09-29 Thread Laurence Marks
What does ssh vlsi1 which lapw1c give, what does "cat *.error" give in the case directory? _ Professor Laurence Marks "Research is to see what everybody else has seen, and to think what nobody else has thought", Albert Szent-Gyorgi www.numis.northwestern.edu On Sun, Sep 29, 2019, 01:17

Re: [Wien] parallel ssh error

2019-09-29 Thread Gavin Abo
I had noticed that ssh vlsi1 'echo $WIENROOT/lapw*' seems to pick up the local environment.  Since you are interested in the remote environment, make sure you issue them as separate commands [1] for vlsi1, vlsi2, vlsi3, and vlsi4: ssh vlsi1 echo $WIENROOT/lapw* exit ssh vlsi4 echo

Re: [Wien] parallel ssh error

2019-09-29 Thread Indranil mal
Now echo $WIENROOT is giving the $WIENROOT location. echo $WIENROOT/lapw* /home/username/WIEN2K/lapw0 /home/username/WIEN2K/lapw0_mpi /home/username/WIEN2K/lapw0para /home/username/WIEN2K/lapw0para_lapw /home/username/WIEN2K/lapw1 /home/username/WIEN2K/lapw1c /home/username/WIEN2K/lapw1c_mpi

Re: [Wien] parallel ssh error

2019-09-28 Thread Gavin Abo
The "sudo service sshd restart" step, which I forgot to copy and paste, that is missing is corrected below. On 9/28/2019 12:18 PM, Gavin Abo wrote: After you set both "SendEnv *" and "AcceptEnv *", did you restart the sshd service [1]?  The following illustrates steps that might help you

Re: [Wien] parallel ssh error

2019-09-28 Thread Gavin Abo
After you set both "SendEnv *" and "AcceptEnv *", did you restart the sshd service [1]?  The following illustrates steps that might help you verify that WIENROOT appears on a remote vlsi node: username@computername:~$ echo $WIENROOT username@computername:~$ export WIENROOT=/servernode1

Re: [Wien] parallel ssh error

2019-09-28 Thread Indranil mal
Sir I have tried with " SetEnv * " Still nothing is coming with echo commad and user name by mistake I posted wrong Otherwise no issue with user name and I have set the parallel options file taksset "no" and remote options are 1 1 in server and client machines. On Sat, 28 Sep 2019 11:36 Gavin

Re: [Wien] parallel ssh error

2019-09-28 Thread Gavin Abo
Respected Sir, In my linux(Ubuntu 18.04 LTS) in ssh_config, and in sshd_config there are two line already "SendEnv LANG LC_*" "AcceptEnv LANG LC_*" respectively. The "LANG LC_*" probably only puts just the local language variables in the remote environment.  Did you follow the previous advice

Re: [Wien] parallel ssh error

2019-09-27 Thread Indranil mal
Respected Sir, In my linux(Ubuntu 18.04 LTS) in ssh_config, and in sshd_config there are two line already "SendEnv LANG LC_*" "AcceptEnv LANG LC_*" respectively. However, ssh vsli1 'echo $WIENROOT' gives nothing (blank). The command ssh vsli1 'pwd $WIENROOT' print "/home/vlsi" the common home

Re: [Wien] parallel ssh error

2019-09-27 Thread Peter Blaha
Ok. So the problem seems to be that in your linux the ssh does not send/accept the "environment". What do you get with: ssh vsli2 'echo $WIENROOT' If you have root permissions, I suggest to do the following: At least on my Linux (Suse) there is a /etc/ssh directory, with files ssh_config

Re: [Wien] parallel ssh error

2019-09-26 Thread Indranil mal
Respected Sir, As per Your suggestion I have done the single process with one iteration successfully encountered no issue in all the nodes. However in parallel running facing the same error grep: *scf1*: No such file or directory cp: cannot stat '.in.tmp': No such file or directory FERMI - Error

Re: [Wien] parallel ssh error

2019-09-26 Thread Peter Blaha
First of all, one of the errors was: lapw1c: command not found You showed us only the existence of "lapw1", not "lapw1c" with the ls commands. However, since you also have: fixerror_lapw: command not found I don't think that this is the problem. - I'm more concerned about the

[Wien] parallel ssh error

2019-09-25 Thread Indranil mal
Dear developers and users I have 5 individual Linux (Ubuntu) pc with intel i7 octa core processors and 16GB RAM in each connected via a 1GBps LAN. password less ssh working properly. I have installed WIEN2K 19 in the one machine (M1 server) in the directory