Hi Damian,
stringdb-static.org resolves to 185.111.60.15 on malbec1 like on
nebbiolo1 and merida1.
Also the following code runs with no problem in an interactive session
on malbec1:
> tmp <- tempfile()
>
download.file("https://stringdb-static.org/download/protein.links.v11.0/9606.protein.links.v11.0.txt.gz";,
tmp)
trying URL
'https://stringdb-static.org/download/protein.links.v11.0/9606.protein.links.v11.0.txt.gz'
Content type 'application/x-gzip' length 71241372 bytes (67.9 MB)
==================================================
downloaded 67.9 MB
I'm not sure why this fails in the context of the nightly builds. Let's
hope it's just an intermittent connectivity issue between malbec1 and
stringdb-static.org. We'll keep an eye on this.
Best,
H.
On 10/27/20 02:15, Damian Szklarczyk wrote:
> Dear Devel team,
>
> My package is failing on one of the platforms (malbec1) and I can’t reproduce
> the problem.
>
> It’s a simple timeout on file download.
> https://urldefense.proofpoint.com/v2/url?u=https-3A__www.bioconductor.org_checkResults_devel_bioc-2DLATEST_STRINGdb_malbec1-2Dchecksrc.html&d=DwIFaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=VCJIZLg4z8KBx_40fL6k8tTqA1sdrezVR9o9tjHz11Y&s=5sxGQVYMTq8docWLZxPmXrvnPYISVOIT90tYs-Q4pcw&e=
>
> We have been recently DDoS’ed and in response we have changed the
> infrastructure a bit.
> Long story short, I think melbec1 didn’t update the DNS, and still points to
> the attacked IP which is bandwidth limited due to the attack.
>
> It’s just guess, but before the DNS switch (about two weeks ago) the other
> platforms were also failing in similar manner.
> Is it possible to confirm that resolved IP for the failing address is the
> same on Malbec1 as on the other platforms?
>
> Best regards,
> Damian.
>
>
> —
> Damian Szklarczyk, PhD
> Bioinformatics / Systems Biology Group
>
> SIB | Swiss Institute of Bioinformatics
> UZH, Institute of Molecular Life Sciences
> Winterthurerstrasse 190
> 8057 Zurich, Switzerland
>
> Mobile: +41 788 3232 97
> Office: +41 446 3531 49
>
>
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>
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--
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Program in Computational Biology
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