RE: [Biojava-l] FramedFeature interface

[David Huen]

On Tue, 4 Sep 2001, Emig, Robin wrote:

>       So what your saying is that if you have the sequence ATGGAC, that
> the first A is position 1 in the sequence/symbol list, but position 0 in the
> frame/phase. I realize that 0,1,2 may be the most common convention, but
> does anyone else see how that can get confusing?
> -Robin
> 
Hmmm.  I've generally coded on the assumption that the frame is the modulo
of the first base of a codon.  Is that incorrect then?

Regards,
David Huen


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