Hi Chris, Thank you for reprorting this problem. It would be very nice if you could also provide your source code. Then I would like to test what happens. You can send source code, substitution matrix, and the two example protein sequences that cause the problems directly to me. I'll then have a look into it.
Cheers Andreas -- Dipl.-Bioinform. Andreas Dräger Eberhard Karls University Tübingen Center for Bioinformatics (ZBIT) Sand 1 72076 Tübingen Germany Phone: +49-7071-29-70436 Fax: +49-7071-29-5091 _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
