Hi all,
By the way, I would like to mention that the bug has been fixed. It was
a problem with the way how the alignment was presented to the user
afterwards, i.e., a problem of the formatting algorithm. The alignment
itself was correct and also when obtaining the GappedSequences after the
alignment, these were correct. The problem was that the formatter was
started with the original lenght of the sequences, which is usually to
short after inserting gaps. This is now solved and the alignment should
work fine now.
Cheers
Andreas
--
Dipl.-Bioinform. Andreas Dräger
Eberhard Karls University Tübingen
Center for Bioinformatics (ZBIT)
Sand 1
72076 Tübingen
Germany
Phone: +49-7071-29-70436
Fax: +49-7071-29-5091
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