biojava-l  

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• 2011/02/14 Re: [Biojava-l] programming error Andy Yates
• 2011/02/14 [Biojava-l] BioJava 3.0.1 released Andreas Prlic
• 2011/02/13 Re: [Biojava-l] programming error Shamanou van Leeuwen
• 2011/02/13 Re: [Biojava-l] programming error Scooter Willis
• 2011/02/13 Re: [Biojava-l] programming error Anant Jain
• 2011/02/13 [Biojava-l] programming error Shamanou van Leeuwen
• 2011/02/11 Re: [Biojava-l] Problem with MultipleSequenceAlignment udana chathuranga
• 2011/02/11 Re: [Biojava-l] Problem with MultipleSequenceAlignment Scooter Willis
• 2011/02/11 [Biojava-l] Problem with MultipleSequenceAlignment udana chathuranga
• 2011/02/11 Re: [Biojava-l] GFF3 Reader Scooter Willis
• 2011/02/11 [Biojava-l] GFF3 Reader Craig Berry
• 2011/02/09 Re: [Biojava-l] average structure Andreas Prlic
• 2011/02/09 [Biojava-l] average structure Jay Vyas
• 2011/02/09 Re: [Biojava-l] Project Ideas GSOC 2011 udana chathuranga
• 2011/02/09 Re: [Biojava-l] Project Ideas GSOC 2011 Andreas Prlic
• 2011/02/08 Re: [Biojava-l] Project Ideas GSOC 2011 udana chathuranga
• 2011/02/08 Re: [Biojava-l] Project Ideas GSOC 2011 Andreas Prlic
• 2011/02/08 [Biojava-l] Project Ideas GSOC 2011 udana chathuranga
• 2011/02/07 Re: [Biojava-l] average or minimal energy structure for nmr structures... Andreas Prlic
• 2011/02/07 [Biojava-l] average or minimal energy structure for nmr structures... Jay Vyas
• 2011/02/05 [Biojava-l] NESCent Seeks Hackathon Whitepapers Hilmar Lapp
• 2011/01/31 [Biojava-l] It is possible to parse phylogenetic trees with bootstrap/posterior probabilities Martin Jones
• 2011/01/30 Re: [Biojava-l] Attempt at Cookbook Andreas Prlic
• 2011/01/29 [Biojava-l] Attempt at Cookbook David Scott
• 2011/01/26 Re: [Biojava-l] The root node is missing when parsing nexus tree files from MrBayes Martin Jones
• 2011/01/25 Re: [Biojava-l] The root node is missing when parsing nexus tree files from MrBayes Tiago Antão
• 2011/01/25 Re: [Biojava-l] The root node is missing when parsing nexus tree files from MrBayes Andreas Prlic
• 2011/01/25 Re: [Biojava-l] The root node is missing when parsing nexus tree files from MrBayes Tiago Antão
• 2011/01/25 [Biojava-l] The root node is missing when parsing nexus tree files from MrBayes Martin Jones
• 2011/01/25 Re: [Biojava-l] From biojava to biojava3 Scooter Willis
• 2011/01/25 [Biojava-l] From biojava to biojava3 Khalil El Mazouari
• 2011/01/24 Re: [Biojava-l] advice on rmsd algorithms.... Andreas Prlic
• 2011/01/24 Re: [Biojava-l] advice on rmsd algorithms.... Jay Vyas
• 2011/01/24 Re: [Biojava-l] advice on rmsd algorithms.... Andreas Prlic
• 2011/01/24 [Biojava-l] advice on rmsd algorithms.... Jay Vyas
• 2011/01/21 Re: [Biojava-l] Write seq in Genbank format Richard Holland
• 2011/01/21 [Biojava-l] Write seq in Genbank format Khalil El Mazouari
• 2011/01/20 Re: [Biojava-l] SimpleGapPenalty defaults Khalil El Mazouari
• 2011/01/19 Re: [Biojava-l] structure alignment seems slow ... Andreas Prlic
• 2011/01/19 Re: [Biojava-l] structure alignment seems slow ... Jay Vyas
• 2011/01/19 Re: [Biojava-l] structure alignment seems slow ... Andreas Prlic
• 2011/01/19 [Biojava-l] structure alignment seems slow ... Jay Vyas
• 2011/01/19 Re: [Biojava-l] SimpleGapPenalty defaults Andreas Prlic
• 2011/01/19 Re: [Biojava-l] SimpleGapPenalty defaults Khalil El Mazouari
• 2011/01/19 Re: [Biojava-l] SimpleGapPenalty defaults Andreas Prlic
• 2011/01/19 [Biojava-l] ScalaLab, a system that can offers high-level scripting access to BioJava sterg
• 2011/01/19 [Biojava-l] SimpleGapPenalty defaults Khalil El Mazouari
• 2011/01/18 [Biojava-l] Registrations open for DAS Workshop 2011 Jonathan Warren
• 2011/01/17 Re: [Biojava-l] new problem: serializable George Waldon
• 2011/01/16 Re: [Biojava-l] Purpose of BioJava mailing list Mark Schreiber
• 2011/01/16 [Biojava-l] Purpose of BioJava mailing list McSweeny, Andrew J
• 2011/01/14 Re: [Biojava-l] unwanted gap in alignments Khalil El Mazouari
• 2011/01/14 Re: [Biojava-l] unwanted gap in alignments Andrew Walsh
• 2011/01/14 Re: [Biojava-l] unwanted gap in alignments Andreas Prlic
• 2011/01/14 Re: [Biojava-l] unwanted gap in alignments Khalil El Mazouari
• 2011/01/14 Re: [Biojava-l] unwanted gap in alignments Scooter Willis
• 2011/01/14 [Biojava-l] unwanted gap in alignments Khalil El Mazouari
• 2011/01/10 Re: [Biojava-l] biojava3 getting the features from alignedsequence Scooter Willis
• 2011/01/10 Re: [Biojava-l] biojava3 getting the features from alignedsequence Hara Dilley
• 2011/01/07 Re: [Biojava-l] biojava3 getting the features from alignedsequence Scooter Willis
• 2011/01/07 Re: [Biojava-l] Biojava-l Digest, Vol 96, Issue 5 Matthew Busse
• 2011/01/07 Re: [Biojava-l] github svn access issues ... resolved Andreas Prlic
• 2011/01/07 Re: [Biojava-l] biojava3 getting the features from alignedsequence Hara Dilley
• 2011/01/07 Re: [Biojava-l] biojava3 getting the features from alignedsequence Marco Valtas
• 2011/01/07 Re: [Biojava-l] biojava3 getting the features from alignedsequence Scooter Willis
• 2011/01/07 Re: [Biojava-l] biojava3 getting the features from alignedsequence Hara Dilley
• 2011/01/06 Re: [Biojava-l] biojava3 getting the features from alignedsequence Scooter Willis
• 2011/01/06 [Biojava-l] github svn access issues Andreas Prlic
• 2011/01/06 Re: [Biojava-l] Checking out code Andreas Prlic
• 2011/01/06 Re: [Biojava-l] Checking out code Andreas Prlic
• 2011/01/06 [Biojava-l] Checking out code Matthew Busse
• 2011/01/06 [Biojava-l] biojava3 getting the features from alignedsequence Hara Dilley
• 2011/01/06 Re: [Biojava-l] how to access biojava source control on svn Steve Darnell
• 2011/01/05 Re: [Biojava-l] how to access biojava source control on svn Andreas Prlic
• 2011/01/05 Re: [Biojava-l] how to access biojava source control on svn Marco Valtas
• 2011/01/05 Re: [Biojava-l] how to access biojava source control on svn Andreas Prlic
• 2011/01/03 Re: [Biojava-l] Error parsing GFF3 file Josh Goodman
• 2010/12/31 Re: [Biojava-l] Error parsing GFF3 file Scooter Willis
• 2010/12/31 [Biojava-l] Error parsing GFF3 file Philipp Comans
• 2010/12/30 Re: [Biojava-l] BioJava3 - Structure - Bug Andreas Prlic
• 2010/12/29 Re: [Biojava-l] QBlast in BioJava3 Sylvain Foisy Ph. D.
• 2010/12/29 Re: [Biojava-l] QBlast in BioJava3 Matthew Busse
• 2010/12/29 Re: [Biojava-l] QBlast in BioJava3 Matthew Busse
• 2010/12/29 Re: [Biojava-l] QBlast in BioJava3 Andreas Prlic
• 2010/12/29 Re: [Biojava-l] QBlast in BioJava3 Sylvain Foisy Ph. D.
• 2010/12/28 [Biojava-l] QBlast in BioJava3 Matthew Busse
• 2010/12/28 [Biojava-l] BioJava 3.0 released Andreas Prlic
• 2010/12/21 Re: [Biojava-l] how to cancel download chemcomp when parser a PDB file Andreas Prlic
• 2010/12/19 Re: [Biojava-l] how to cancel download chemcomp when parser a PDB file Fico
• 2010/12/19 [Biojava-l] biojava3.0-beta4 Andreas Prlic
• 2010/12/19 Re: [Biojava-l] how to cancel download chemcomp when parser a PDB file Andreas Prlic
• 2010/12/19 Re: [Biojava-l] Thread safety of the AtomCache Andreas Prlic
• 2010/12/18 [Biojava-l] Thread safety of the AtomCache Daniel Asarnow
• 2010/12/18 Re: [Biojava-l] how to cancel download chemcomp when parser a PDB file Daniel Asarnow
• 2010/12/17 Re: [Biojava-l] how to cancel download chemcomp when parser a PDB file Andreas Prlic
• 2010/12/16 Re: [Biojava-l] how to cancel download chemcomp when parser a PDB file Steve Darnell
• 2010/12/15 [Biojava-l] Is there cvtree algorithm in biojava? marcelo rodriguez
• 2010/12/15 [Biojava-l] how to cancel download chemcomp when parser a PDB file Fico
• 2010/12/13 Re: [Biojava-l] predicting atoms from backbone Andreas Prlic
• 2010/12/12 [Biojava-l] predicting atoms from backbone Jay Vyas
• 2010/12/08 Re: [Biojava-l] SequenceMixin Error in BioJava3 Alignment Andy Yates
• 2010/12/06 Re: [Biojava-l] SequenceMixin Error in BioJava3 Alignment Scooter Willis
• 2010/12/06 Re: [Biojava-l] SequenceMixin Error in BioJava3 Alignment Andy Yates
• 2010/12/06 Re: [Biojava-l] SequenceMixin Error in BioJava3 Alignment Chris Friedline
• 2010/12/06 Re: [Biojava-l] SequenceMixin Error in BioJava3 Alignment Chris Friedline
• 2010/12/06 Re: [Biojava-l] SequenceMixin Error in BioJava3 Alignment Andreas Prlic
• 2010/12/06 Re: [Biojava-l] SequenceMixin Error in BioJava3 Alignment Andy Yates
• 2010/12/06 Re: [Biojava-l] SequenceMixin Error in BioJava3 Alignment Andy Yates
• 2010/12/06 [Biojava-l] SequenceMixin Error in BioJava3 Alignment Chris Friedline
• 2010/12/04 Re: [Biojava-l] PDBFileParser question using PDBID 470D Andreas Prlic
• 2010/12/03 Re: [Biojava-l] PDBFileParser question using PDBID 470D Steve Darnell
• 2010/12/01 [Biojava-l] newbie question about gff Rusch, Michael
• 2010/11/29 Re: [Biojava-l] PDBFileParser question using PDBID 470D Andreas Prlic
• 2010/11/29 [Biojava-l] PDBFileParser question using PDBID 470D Steve Darnell
• 2010/11/22 Re: [Biojava-l] biojava iupac atom names for pdb files Andreas Prlic
• 2010/11/22 [Biojava-l] biojava iupac atom names for pdb files Jay Vyas
• 2010/11/17 [Biojava-l] new biojava related paper Andreas Prlic
• 2010/11/16 Re: [Biojava-l] AtomCache: auto-fetch and chemcompinfo Andreas Prlic
• 2010/11/16 [Biojava-l] AtomCache: auto-fetch and chemcompinfo Daniel Asarnow
• 2010/11/04 [Biojava-l] Fyi: Client side high performance computing project using Biojava Raphael André Bauer
• 2010/11/03 Re: [Biojava-l] merging structures Jay Vyas
• 2010/11/03 Re: [Biojava-l] merging structures Andreas Prlic
• 2010/11/03 [Biojava-l] merging structures Jay Vyas
• 2010/11/02 Re: [Biojava-l] Superimposing structure pieces Daniel Asarnow
• 2010/11/01 Re: [Biojava-l] reading Nexus files Scooter Willis
• 2010/11/01 Re: [Biojava-l] biojava 3 jmol Andreas Prlic
• 2010/11/01 [Biojava-l] biojava 3 jmol Jay Vyas
• 2010/11/01 Re: [Biojava-l] reading Nexus files Tiago Antão
• 2010/11/01 Re: [Biojava-l] reading Nexus files filip
• 2010/11/01 Re: [Biojava-l] reading Nexus files Tiago Antão
• 2010/11/01 Re: [Biojava-l] reading Nexus files Andy Yates
• 2010/11/01 [Biojava-l] reading Nexus files filip
• 2010/10/31 Re: [Biojava-l] Superimposing structure pieces Andreas Prlic
• 2010/10/31 [Biojava-l] Superimposing structure pieces Daniel Asarnow
• 2010/10/30 Re: [Biojava-l] K-mers Andreas Prlic
• 2010/10/30 Re: [Biojava-l] K-mers jitesh dundas
• 2010/10/30 Re: [Biojava-l] K-mers Andy Yates
• 2010/10/29 Re: [Biojava-l] New Biojava Logo Scooter Willis
• 2010/10/29 Re: [Biojava-l] New Biojava Logo Mark Fortner
• 2010/10/29 Re: [Biojava-l] New Biojava Logo simon rayner
• 2010/10/29 Re: [Biojava-l] Biojava-l Digest, Vol 93, Issue 21 Andreas Prlic
• 2010/10/29 Re: [Biojava-l] JavaDocs and Backwards compatibility Jay Vyas
• 2010/10/29 Re: [Biojava-l] K-mers jitesh dundas
• 2010/10/29 Re: [Biojava-l] K-mers Andy Yates
• 2010/10/29 Re: [Biojava-l] Biojava-l Digest, Vol 93, Issue 21 Mark Schreiber
• 2010/10/29 Re: [Biojava-l] Biojava-l Digest, Vol 93, Issue 21 Scooter Willis
• 2010/10/29 Re: [Biojava-l] K-mers Mark Fortner
• 2010/10/29 Re: [Biojava-l] K-mers jitesh dundas
• 2010/10/29 Re: [Biojava-l] Biojava-l Digest, Vol 93, Issue 21 Jay Vyas
• 2010/10/29 Re: [Biojava-l] K-mers Andy Yates
• 2010/10/29 Re: [Biojava-l] K-mers Andy Yates
• 2010/10/29 Re: [Biojava-l] K-mers Mark Fortner
• 2010/10/29 Re: [Biojava-l] K-mers Vishal Thapar
• 2010/10/29 Re: [Biojava-l] New Biojava Logo Alessandro Cipriani
• 2010/10/29 [Biojava-l] New Biojava Logo jitendra narayan
• 2010/10/29 Re: [Biojava-l] K-mers Andy Yates
• 2010/10/29 Re: [Biojava-l] K-mers jitesh dundas
• 2010/10/29 Re: [Biojava-l] K-mers jitesh dundas
• 2010/10/29 Re: [Biojava-l] K-mers Andy Yates
• 2010/10/29 Re: [Biojava-l] K-mers jitesh dundas
• 2010/10/29 Re: [Biojava-l] K-mers Andy Yates
• 2010/10/28 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Andreas Prlic
• 2010/10/28 Re: [Biojava-l] biojava maven integration Andreas Prlic
• 2010/10/28 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Daniel Asarnow
• 2010/10/28 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Daniel Asarnow
• 2010/10/28 Re: [Biojava-l] biojava maven integration Jay Vyas
• 2010/10/28 [Biojava-l] biojava maven integration Jay Vyas
• 2010/10/28 [Biojava-l] K-mers Vishal Thapar
• 2010/10/28 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Andreas Prlic
• 2010/10/27 [Biojava-l] Bad PDB files and batch processing with PDBFileReader Daniel Asarnow
• 2010/10/27 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Andreas Prlic
• 2010/10/27 Re: [Biojava-l] Tr: Retrieve Information from GenBank file jc.lucky
• 2010/10/27 Re: [Biojava-l] Tr: Retrieve Information from GenBank file Richard Holland
• 2010/10/27 Re: [Biojava-l] Tr: Retrieve Information from GenBank file jc.lucky
• 2010/10/27 Re: [Biojava-l] Tr: Retrieve Information from GenBank file Scooter Willis
• 2010/10/27 [Biojava-l] Tr: Retrieve Information from GenBank file jc.lucky
• 2010/10/27 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Daniel Asarnow
• 2010/10/26 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Andreas Prlic
• 2010/10/26 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Andreas Prlic
• 2010/10/26 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Daniel Asarnow
• 2010/10/26 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Daniel Asarnow
• 2010/10/26 Re: [Biojava-l] Bad PDB files and batch processing with PDBFileReader Andreas Prlic
• 2010/10/26 [Biojava-l] Bad PDB files and batch processing with PDBFileReader Daniel Asarnow
• 2010/10/26 Re: [Biojava-l] Global alignment problem (bug?) in NeedlemanWunsch Andreas Dräger
• 2010/10/26 Re: [Biojava-l] Global alignment problem (bug?) in NeedlemanWunsch Chris Friedline
• 2010/10/26 Re: [Biojava-l] Global alignment problem (bug?) in NeedlemanWunsch Chris Friedline
• 2010/10/26 Re: [Biojava-l] Global alignment problem (bug?) in NeedlemanWunsch Andreas Prlic
• 2010/10/25 [Biojava-l] Koen Bruynseels is out of the office. koen . bruynseels
• 2010/10/24 Re: [Biojava-l] Global alignment problem (bug?) in NeedlemanWunsch Chris Friedline
• 2010/10/24 Re: [Biojava-l] Global alignment problem (bug?) in NeedlemanWunsch Andreas Draeger
• 2010/10/24 [Biojava-l] Global alignment problem (bug?) in NeedlemanWunsch Chris Friedline
• 2010/10/24 [Biojava-l] Test Message Chris Friedline
• 2010/10/22 [Biojava-l] 3.0-alpha2 Andreas Prlic
• 2010/10/22 [Biojava-l] Retrieve Information from GenBank file jc.lucky
• 2010/10/21 Re: [Biojava-l] Biojava-l Digest, Vol 93, Issue 9 Richard Holland
• 2010/10/21 Re: [Biojava-l] Biojava-l Digest, Vol 93, Issue 9 sobia idrees
• 2010/10/21 Re: [Biojava-l] Biojava-l Digest, Vol 93, Issue 9 sobia idrees
• 2010/10/19 [Biojava-l] feature request - full query description from blast result Hedwig Kurka
• 2010/10/15 Re: [Biojava-l] BioJava translation Peter
• 2010/10/14 Re: [Biojava-l] How to share code while protecting copyrights? Hilmar Lapp

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