Thanks Andreas, of course, that's where I can configure it. Thanks for the clarification. Hannes
On Fri, Nov 4, 2011 at 07:18, Andreas Prlic <[email protected]> wrote: > Hi Hannes, > > I think that depends which substitution matrix you are using. Some of > them don't support ambiguity codes. > > Andreas > > On Thu, Nov 3, 2011 at 7:17 AM, Hannes Brandstätter-Müller > <[email protected]> wrote: >> Does the biojava sequence alignment support IUB Codes? >> http://en.wikipedia.org/wiki/FASTA_format#Sequence_representation >> >> Hannes >> _______________________________________________ >> Biojava-l mailing list - [email protected] >> http://lists.open-bio.org/mailman/listinfo/biojava-l >> > _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
