biojava-l

Messages by Date

2012/02/06 [Biojava-l] Google Summer of Code 2012 Andreas Prlic
2012/02/02 [Biojava-l] Only 10 days left to register for DAS Workshop 2012 Jonathan Warren
2012/01/24 Re: [Biojava-l] Fastq benchmark Michael Heuer
2012/01/24 Re: [Biojava-l] Fastq benchmark Scooter Willis
2012/01/24 [Biojava-l] Fastq benchmark Mic
2012/01/16 Re: [Biojava-l] compare sequences Peter Cock
2012/01/16 [Biojava-l] compare sequences Mic
2012/01/15 [Biojava-l] Unique reads Mic
2012/01/11 Re: [Biojava-l] FASTA Header Parser Scooter Willis
2012/01/11 Re: [Biojava-l] FASTA Header Parser Hannes Brandstätter-Müller
2012/01/11 [Biojava-l] FASTA Header Parser Hannes Brandstätter-Müller
2012/01/08 Re: [Biojava-l] trim adapter segment Hannes Brandstätter-Müller
2012/01/06 [Biojava-l] trim adapter segment Jason
2012/01/05 [Biojava-l] Registrations for DAS Workshop 2012 Jonathan Warren
2012/01/04 Re: [Biojava-l] BioJava in education Hannes Brandstätter-Müller
2011/12/23 Re: [Biojava-l] Is a modification of the FASTA parser for my needs easy or should I implement something else? Peter Troshin
2011/12/22 Re: [Biojava-l] Cookbook entry - feedback please Andreas Prlic
2011/12/22 Re: [Biojava-l] Cookbook entry - feedback please Hannes Brandstätter-Müller
2011/12/22 Re: [Biojava-l] Cookbook entry - feedback please Andreas Prlic
2011/12/22 [Biojava-l] Cookbook entry - feedback please Hannes Brandstätter-Müller
2011/12/21 Re: [Biojava-l] Is a modification of the FASTA parser for my needs easy or should I implement something else? Hannes Brandstätter-Müller
2011/12/21 Re: [Biojava-l] Is a modification of the FASTA parser for my needs easy or should I implement something else? Andreas Prlic
2011/12/21 Re: [Biojava-l] Is a modification of the FASTA parser for my needs easy or should I implement something else? Hannes Brandstätter-Müller
2011/12/21 Re: [Biojava-l] Is a modification of the FASTA parser for my needs easy or should I implement something else? Andreas Prlic
2011/12/21 Re: [Biojava-l] Is a modification of the FASTA parser for my needs easy or should I implement something else? Peter Cock
2011/12/19 [Biojava-l] Is a modification of the FASTA parser for my needs easy or should I implement something else? Hannes Brandstätter-Müller
2011/12/07 Re: [Biojava-l] mmView - a tool for mmCIF exploration Daniel Svozil
2011/12/07 Re: [Biojava-l] mmView - a tool for mmCIF exploration Andreas Prlic
2011/12/06 Re: [Biojava-l] IndexOutOfBounds Exception when performing Pairwise Alignment Andreas Prlic
2011/12/06 [Biojava-l] mmView - a tool for mmCIF exploration Daniel Svozil
2011/12/06 Re: [Biojava-l] IndexOutOfBounds Exception when performing Pairwise Alignment Hannes Brandstätter-Müller
2011/12/06 Re: [Biojava-l] IndexOutOfBounds Exception when performing Pairwise Alignment Hannes Brandstätter-Müller
2011/12/06 Re: [Biojava-l] IndexOutOfBounds Exception when performing Pairwise Alignment Hannes Brandstätter-Müller
2011/12/05 Re: [Biojava-l] IndexOutOfBounds Exception when performing Pairwise Alignment Andreas Prlic
2011/12/04 Re: [Biojava-l] IndexOutOfBounds Exception when performing Pairwise Alignment Hannes Brandstätter-Müller
2011/12/02 Re: [Biojava-l] IndexOutOfBounds Exception when performing Pairwise Alignment Andreas Prlic
2011/12/01 [Biojava-l] IndexOutOfBounds Exception when performing Pairwise Alignment Hannes Brandstätter-Müller
2011/11/23 Re: [Biojava-l] Antw: Re: Exception thrown when parsing GenBank file Peter Cock
2011/11/23 Re: [Biojava-l] Antw: Re: Exception thrown when parsing GenBank file George Waldon
2011/11/23 Re: [Biojava-l] Antw: Re: Exception thrown when parsing GenBank file Andreas Prlic
2011/11/23 [Biojava-l] Antw: Re: Exception thrown when parsing GenBank file Dietmar Birzer
2011/11/16 [Biojava-l] biojava-ensembl Lance Frohman
2011/11/15 Re: [Biojava-l] Calculating edit distance between 2 DNA Sequences Andreas Prlic
2011/11/15 Re: [Biojava-l] Calculating edit distance between 2 DNA Sequences Hannes Brandstätter-Müller
2011/11/14 Re: [Biojava-l] Rename RichSequence George Waldon
2011/11/14 Re: [Biojava-l] Exception thrown when parsing GenBank file Peter Cock
2011/11/14 [Biojava-l] Exception thrown when parsing GenBank file Dietmar Birzer
2011/11/14 [Biojava-l] Rename RichSequence Khalil El Mazouari
2011/11/09 Re: [Biojava-l] Calculating edit distance between 2 DNA Sequences Hannes Brandstätter-Müller
2011/11/07 Re: [Biojava-l] BioJava in education Amr AL-Hossary
2011/11/07 Re: [Biojava-l] BioJava in education Amr AL-Hossary
2011/11/07 Re: [Biojava-l] Calculating edit distance between 2 DNA Sequences Chris Friedline
2011/11/07 Re: [Biojava-l] Calculating edit distance between 2 DNA Sequences forumjspro
2011/11/07 Re: [Biojava-l] Calculating edit distance between 2 DNA Sequences Andreas Prlic
2011/11/07 Re: [Biojava-l] Calculating edit distance between 2 DNA Sequences Hannes Brandstätter-Müller
2011/11/05 Re: [Biojava-l] BioJava in education Chris Friedline
2011/11/04 Re: [Biojava-l] BioJava in education Andreas Prlic
2011/11/04 Re: [Biojava-l] BioJava in education simon rayner
2011/11/04 Re: [Biojava-l] BioJava in education Andreas Prlic
2011/11/04 Re: [Biojava-l] BioJava in education Chris Friedline
2011/11/03 [Biojava-l] BioJava in education Andreas Prlic
2011/11/03 Re: [Biojava-l] Sequence Alignment and IUB Codes Hannes Brandstätter-Müller
2011/11/03 Re: [Biojava-l] Sequence Alignment and IUB Codes Andreas Prlic
2011/11/03 [Biojava-l] Sequence Alignment and IUB Codes Hannes Brandstätter-Müller
2011/11/03 [Biojava-l] Calculating edit distance between 2 DNA Sequences Hannes Brandstätter-Müller
2011/11/01 [Biojava-l] Invitation to connect on LinkedIn Huijie Qiao via LinkedIn
2011/11/01 Re: [Biojava-l] [Biojava-dev] Genbank import Andreas Prlic
2011/11/01 Re: [Biojava-l] queries on biojava Andreas Prlic
2011/10/27 Re: [Biojava-l] What's a good sequence to highlight features in BioJava? John Kern
2011/10/27 Re: [Biojava-l] What's a good sequence to highlight features in BioJava? Andreas Prlic
2011/10/26 [Biojava-l] What's a good sequence to highlight features in BioJava? John Kern
2011/10/25 Re: [Biojava-l] demo directory in API Andreas Prlic
2011/10/25 [Biojava-l] demo directory in API John Kern
2011/10/20 Re: [Biojava-l] demos from 1.8 Andreas Prlic
2011/10/20 Re: [Biojava-l] demos from 1.8 John Kern
2011/10/20 Re: [Biojava-l] demos from 1.8 Andreas Prlic
2011/10/20 [Biojava-l] demos from 1.8 John Kern
2011/10/20 [Biojava-l] Multiple Sequence Alignment - Limits? John Kern
2011/10/20 [Biojava-l] Undeclared/uncaught exception in Fasta Parser Hannes Brandstätter-Müller
2011/10/19 Re: [Biojava-l] Biojava-l Digest, Vol 105, Issue 12 Khalil El Mazouari
2011/10/19 Re: [Biojava-l] Status of org.biojava3.data.sequence.SequenceUtil ? Peter Troshin
2011/10/19 [Biojava-l] Status of org.biojava3.data.sequence.SequenceUtil ? jvb
2011/10/19 Re: [Biojava-l] Multiple Sequence Alignment - Limits? Spencer Bliven
2011/10/19 Re: [Biojava-l] Multiple Sequence Alignment - Limits? Hannes Brandstätter-Müller
2011/10/18 Re: [Biojava-l] Multiple Sequence Alignment - Limits? Hannes Brandstätter-Müller
2011/10/18 Re: [Biojava-l] Multiple Sequence Alignment - Limits? Andreas Prlic
2011/10/18 Re: [Biojava-l] is the tutorial in sync with the latest version? John Kern
2011/10/18 Re: [Biojava-l] Multiple Sequence Alignment - Limits? Hannes Brandstätter-Müller
2011/10/17 Re: [Biojava-l] is the tutorial in sync with the latest version? Andreas Prlic
2011/10/17 [Biojava-l] is the tutorial in sync with the latest version? John Kern
2011/10/14 Re: [Biojava-l] Stockholm Parser Implementation? Jim Procter
2011/10/12 Re: [Biojava-l] Stockholm Parser Implementation? Andreas Prlic
2011/10/12 Re: [Biojava-l] User defined substitution matrix. Andreas Prlic
2011/10/11 Re: [Biojava-l] BioJava Help Andreas Prlic
2011/10/10 [Biojava-l] Stockholm Parser Implementation? Vincent Xue
2011/10/10 Re: [Biojava-l] Biojava-l Digest, Vol 105, Issue 2 Muhammad Tariq Pervez
2011/10/10 Re: [Biojava-l] Biojava-l Digest, Vol 105, Issue 5 Shakuntala Baichoo
2011/10/09 Re: [Biojava-l] BioJava Help Andreas Prlic
2011/10/06 Re: [Biojava-l] losing meta-info after multiple sequence alignment Spencer Bliven
2011/10/06 Re: [Biojava-l] BioJava Help Andreas Prlic
2011/10/06 Re: [Biojava-l] losing meta-info after multiple sequence alignment Scooter Willis
2011/10/06 Re: [Biojava-l] losing meta-info after multiple sequence alignment Hannes Brandstätter-Müller
2011/10/06 Re: [Biojava-l] losing meta-info after multiple sequence alignment Hannes Brandstätter-Müller
2011/10/06 [Biojava-l] losing meta-info after multiple sequence alignment Hannes Brandstätter-Müller
2011/10/05 Re: [Biojava-l] NullPointerException when using Alignments.getMultipleSequenceAlignment Andreas Prlic
2011/10/05 Re: [Biojava-l] NullPointerException when using Alignments.getMultipleSequenceAlignment Hannes Brandstätter-Müller
2011/10/05 Re: [Biojava-l] NullPointerException when using Alignments.getMultipleSequenceAlignment Andreas Prlic
2011/10/05 Re: [Biojava-l] NullPointerException when using Alignments.getMultipleSequenceAlignment Hannes Brandstätter-Müller
2011/10/05 Re: [Biojava-l] NullPointerException when usingAlignments.getMultipleSequenceAlignment Amr AL-Hossary
2011/10/05 Re: [Biojava-l] NullPointerException when using Alignments.getMultipleSequenceAlignment Spencer Bliven
2011/10/05 Re: [Biojava-l] NullPointerException when using Alignments.getMultipleSequenceAlignment Andreas Prlic
2011/10/05 Re: [Biojava-l] NullPointerException when using Alignments.getMultipleSequenceAlignment Hannes Brandstätter-Müller
2011/10/05 [Biojava-l] NullPointerException when using Alignments.getMultipleSequenceAlignment Hannes Brandstätter-Müller
2011/10/03 [Biojava-l] VCF parser Tiago Antão
2011/09/29 [Biojava-l] Invitation to connect on LinkedIn Huijie Qiao via LinkedIn
2011/09/21 [Biojava-l] couple of new structure alignment & protein domain features Andreas Prlic
2011/09/21 [Biojava-l] NullPointerException in Hidden Markov Model Hashem Koohy
2011/09/20 Re: [Biojava-l] why can't biojava fold RNA? Andreas Prlic
2011/09/20 Re: [Biojava-l] why can't biojava fold RNA? Mark Fortner
2011/09/20 Re: [Biojava-l] why can't biojava fold RNA? Daniel Quest
2011/09/20 Re: [Biojava-l] Biojava-l Digest, Vol 104, Issue 7 JAX
2011/09/20 Re: [Biojava-l] why can't biojava fold RNA? Andreas Prlic
2011/09/19 [Biojava-l] why can't biojava fold RNA? quan zou
2011/09/19 Re: [Biojava-l] Biojava-l Digest, Vol 104, Issue 6 Khalil El Mazouari
2011/09/19 [Biojava-l] UniprotParser Saif Ur-Rehman
2011/09/18 Re: [Biojava-l] [Biojava-dev] A question about multiple alignment Andreas Prlic
2011/09/17 Re: [Biojava-l] atomcache with a file Daniel Asarnow
2011/09/16 Re: [Biojava-l] atomcache with a file JAX
2011/09/16 Re: [Biojava-l] atomcache with a file Andreas Prlic
2011/09/16 Re: [Biojava-l] atomcache with a file Spencer Bliven
2011/09/16 Re: [Biojava-l] atomcache with a file Amr AL-Hossary
2011/09/16 Re: [Biojava-l] atomcache with a file Andreas Prlic
2011/09/15 Re: [Biojava-l] atomcache with a file Jay Vyas
2011/09/15 Re: [Biojava-l] atomcache with a file Jay Vyas
2011/09/15 Re: [Biojava-l] atomcache with a file Andreas Prlic
2011/09/15 [Biojava-l] atomcache with a file Jay Vyas
2011/09/06 [Biojava-l] Invitation to connect on LinkedIn Indu Pandey
2011/09/02 [Biojava-l] BioJava 3.0.2 released Andreas Prlic
2011/08/25 Re: [Biojava-l] Work completed for GSoC:AAPropertiesComputation Peter Troshin
2011/08/25 Re: [Biojava-l] Work completed for GSoC:AAPropertiesComputation Andreas Prlic
2011/08/24 [Biojava-l] Work completed for GSoC:AAPropertiesComputation Chuan Hock Koh
2011/08/24 Re: [Biojava-l] exception in DisplayAFP.createArtificialStructure Daniel Asarnow
2011/08/15 Re: [Biojava-l] exception in DisplayAFP.createArtificialStructure Andreas Prlic
2011/08/15 Re: [Biojava-l] exception in DisplayAFP.createArtificialStructure Daniel Asarnow
2011/08/14 Re: [Biojava-l] exception in DisplayAFP.createArtificialStructure Andreas Prlic
2011/08/14 [Biojava-l] exception in DisplayAFP.createArtificialStructure Daniel Asarnow
2011/08/10 Re: [Biojava-l] structure alignment display Andreas Prlic
2011/08/10 [Biojava-l] structure alignment display Daniel Asarnow
2011/08/04 [Biojava-l] improving biojava documentation Andreas Prlic
2011/08/04 Re: [Biojava-l] bioclojure Daniel Quest
2011/08/04 Re: [Biojava-l] bioclojure Brad Chapman
2011/08/03 Re: [Biojava-l] NullPointerException Exception While Creating DNA MultipleSequenceAlignment Andreas Prlic
2011/08/03 [Biojava-l] bioclojure Jay Vyas
2011/08/01 [Biojava-l] Job opportunity: User Interface Design and Web Application Developer Hilmar Lapp
2011/07/28 Re: [Biojava-l] ab1 files Amr AL-Hossary
2011/07/28 Re: [Biojava-l] ab1 files Scooter Willis
2011/07/28 [Biojava-l] ab1 files Trent Schafer
2011/07/26 [Biojava-l] Invitation for Open Source Project Peter Penzov
2011/07/26 Re: [Biojava-l] NullPointerException Exception While Creating DNA MultipleSequenceAlignment Muhammad Tariq Pervez
2011/07/25 Re: [Biojava-l] NullPointerException Exception While Creating DNA MultipleSequenceAlignment Scooter Willis
2011/07/25 Re: [Biojava-l] NullPointerException Exception While Creating DNA MultipleSequenceAlignment Muhammad Tariq Pervez
2011/07/22 Re: [Biojava-l] NullPointerException Exception While Creating DNA MultipleSequenceAlignment Scooter Willis
2011/07/22 [Biojava-l] NullPointerException Exception While Creating DNA MultipleSequenceAlignment Muhammad Tariq Pervez
2011/07/21 Re: [Biojava-l] maven question Andreas Prlic
2011/07/21 Re: [Biojava-l] maven question Daniel Quest
2011/07/21 Re: [Biojava-l] maven question Andreas Prlic
2011/07/21 [Biojava-l] maven question Daniel Quest
2011/07/17 Re: [Biojava-l] help with short reads ? Peter Cock
2011/07/13 Re: [Biojava-l] Local DB BLAST Comparison/Search Andreas Prlic
2011/07/12 Re: [Biojava-l] GSoC:AAPropertiesComputation Updates Scooter Willis
2011/07/11 [Biojava-l] GSoC:AAPropertiesComputation Updates Chuan Hock Koh
2011/07/11 Re: [Biojava-l] Page creation in Biojava Andreas Prlic
2011/07/11 [Biojava-l] Calculating consensus sequence Muhammad Tariq Pervez
2011/07/11 Re: [Biojava-l] Page creation in Biojava Muhammad Tariq Pervez
2011/07/08 Re: [Biojava-l] Page creation in Biojava Andreas Prlic
2011/07/08 Re: [Biojava-l] Page creation in Biojava Muhammad Tariq Pervez
2011/07/07 Re: [Biojava-l] No. of gaps in aligned sequences Muhammad Tariq Pervez
2011/07/07 Re: [Biojava-l] Biojava-l Digest, Vol 102, Issue 4 Muhammad Tariq Pervez
2011/07/07 Re: [Biojava-l] Page creation in Biojava Andreas Prlic
2011/07/07 [Biojava-l] Local DB BLAST Comparison/Search Mark Stewart
2011/07/07 Re: [Biojava-l] No. of gaps in aligned sequences Andreas Prlic
2011/07/07 [Biojava-l] Page creation in Biojava Muhammad Tariq Pervez
2011/07/06 [Biojava-l] BioJava Gene Hierarchies Daniel Di Giulio
2011/07/06 [Biojava-l] No. of gaps in aligned sequences Muhammad Tariq Pervez
2011/07/01 Re: [Biojava-l] Help on NCBIQBlastService and BlastXMLQuery Sylvain Foisy
2011/06/30 [Biojava-l] Help on NCBIQBlastService and BlastXMLQuery Shakuntala Baichoo
2011/06/30 Re: [Biojava-l] Biojava-l Digest, Vol 101, Issue 14 Khalil El Mazouari
2011/06/30 Re: [Biojava-l] make feature to create embl or genbank file George Waldon
2011/06/30 Re: [Biojava-l] make feature to create embl or genbank file Richard Holland
2011/06/30 Re: [Biojava-l] make feature to create embl or genbank file Hedwig Kurka
2011/06/30 Re: [Biojava-l] make feature to create embl or genbank file Hedwig Kurka
2011/06/29 Re: [Biojava-l] make feature to create embl or genbank file George Waldon
2011/06/29 [Biojava-l] make feature to create embl or genbank file Hedwig Kurka
2011/06/29 Re: [Biojava-l] DNATools lower case? Alastair Kilpatrick
2011/06/28 [Biojava-l] Central registration place for BAM, BigBed and BigWig files Jonathan Warren
2011/06/25 [Biojava-l] help with short reads ? Jay Vyas
2011/06/22 Re: [Biojava-l] CEAlign > 0 for exact same structures ? Andreas Prlic
2011/06/22 [Biojava-l] CEAlign > 0 for exact same structures ? Jay Vyas
2011/06/22 Re: [Biojava-l] binning structures by quality.... Steve Darnell
2011/06/22 [Biojava-l] Biojava, bio prl bio php bioryby bio python biolisp bioclispse Lic. Marcelo Ignacio Bondi