Hmmm. Your results look great, but 144 cycles of spherical morphing is
certainly not normal. I think the line in the script that does this is this
one:
#MULTIRESOLUTION MORPHING
caret_command -surface-sphere-multi-morph $SPEC $FIDUCIAL_MWS $SPHERE_MWS
$TOPO
There are no parameters for this one; they are built in, apparently, so I'm not
sure what could be going on.
I'm stumped.
On Nov 25, 2013, at 4:27 PM, Taosheng Liu <[email protected]> wrote:
> Hi Donna,
> I've been using the preborder and postborder scripts to convert files from
> FreeSurfer to Caret (hope you still remember I was involved in early testing
> of these scripts). Things have been working great. I haven't done this for a
> while, but recently I changed computer and installed the current version of
> Caret and these scripts, and there seems to be some difference in how the
> code works. I just want to make sure this is expected behavior.
> Specifically, when we run postborder script, it takes much longer. It seems
> either the script or caret_command is doing more iterations, because we now
> see files like this after the script finishes:
>
> Human.FS040.L.SPHERICAL.73730.MWS.SPHERE_CYCLE144.coord
>
> There're a lot of files like this, with consecutive names from CYCLE1 to
> CYCLE 144, whereas previously it only goes from CYCLE1 to CYCLE4. My question
> is: is this expected behavior, or is there something wrong in how we ran the
> scripts?
> I've posted the result from the check_reg here
> http://psychology.msu.edu/liulab/files/html_out/views.html
>
> They look just like before, but I'd like to confirm whether this is normal.
> Thank you very much,
>
> --Taosheng
>
> --
> Taosheng Liu
> Assistant Professor
> Department of Psychology
> Michigan State University
> 316 Physics Road
> East Lansing, MI 48824
> PH: 517.432.6694
>
>
> _______________________________________________
> caret-users mailing list
> [email protected]
> http://brainvis.wustl.edu/mailman/listinfo/caret-users
_______________________________________________
caret-users mailing list
[email protected]
http://brainvis.wustl.edu/mailman/listinfo/caret-users
