Hi Donna,
Yes I can see that line of code in the script. Have you other others
on this list run this command lately? I wonder if you also see this many
cycles. If not, I wonder if there is some global setting I should set,
or something is off with my data. I can certainly supply the data if needed.
Thank you,
--Taosheng
On 11/25/2013 06:50 PM, Donna Dierker wrote:
Hmmm. Your results look great, but 144 cycles of spherical morphing is
certainly not normal. I think the line in the script that does this is this
one:
#MULTIRESOLUTION MORPHING
caret_command -surface-sphere-multi-morph $SPEC $FIDUCIAL_MWS $SPHERE_MWS
$TOPO
There are no parameters for this one; they are built in, apparently, so I'm not
sure what could be going on.
I'm stumped.
On Nov 25, 2013, at 4:27 PM, Taosheng Liu <[email protected]> wrote:
Hi Donna,
I've been using the preborder and postborder scripts to convert files from
FreeSurfer to Caret (hope you still remember I was involved in early testing of
these scripts). Things have been working great. I haven't done this for a
while, but recently I changed computer and installed the current version of
Caret and these scripts, and there seems to be some difference in how the code
works. I just want to make sure this is expected behavior.
Specifically, when we run postborder script, it takes much longer. It seems
either the script or caret_command is doing more iterations, because we now see
files like this after the script finishes:
Human.FS040.L.SPHERICAL.73730.MWS.SPHERE_CYCLE144.coord
There're a lot of files like this, with consecutive names from CYCLE1 to CYCLE
144, whereas previously it only goes from CYCLE1 to CYCLE4. My question is: is
this expected behavior, or is there something wrong in how we ran the scripts?
I've posted the result from the check_reg here
http://psychology.msu.edu/liulab/files/html_out/views.html
They look just like before, but I'd like to confirm whether this is normal.
Thank you very much,
--Taosheng
--
Taosheng Liu
Assistant Professor
Department of Psychology
Michigan State University
316 Physics Road
East Lansing, MI 48824
PH: 517.432.6694
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_______________________________________________
caret-users mailing list
[email protected]
http://brainvis.wustl.edu/mailman/listinfo/caret-users
--
Taosheng Liu
Assistant Professor
Department of Psychology
Michigan State University
316 Physics Road
East Lansing, MI 48824
PH: 517.432.6694
_______________________________________________
caret-users mailing list
[email protected]
http://brainvis.wustl.edu/mailman/listinfo/caret-users
