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You can use grasp or msms/Raster3D to calculate and visualise protein surfaces. But how would you _compare_ surfaces quantitatively? -- Tim Gruene Institut fuer anorganische Chemie Tammannstr. 4 D-37077 Goettingen GPG Key ID = A46BEE1A On Wed, 21 Jun 2006, Tea Pavkov wrote: > *** For details on how to be removed from this list visit the *** > *** CCP4 home page http://www.ccp4.ac.uk *** > > > Dear ccp4bb, > > I would like to compare surfaces (not only ligand binding sites) of the > proteins within the same family. Do you know if there is a program doing > that or do you know people who are involved in developing something like > that? > > Thank you in advance! > > Tea > > > --------------------------------------------------------- > Mag. Pavkov Tea > Institute of Chemistry - Structural Biology > Karl-Franzens-University Graz > Heinrichstrasse 28, 8010 Graz, Austria > > Phone: ++43 316 380 5414 > Fax: ++43 316 380 9850 > http://PhysChem.kfunigraz.ac.at/sb > --------------------------------------------------------- >
