Hi,
 
I just wanted to say thanks for all the help!  I was including the full path when defining the TEMPlate keyword, thus my mistake.  D'oh!
 
 
Cheers,
Nick
 
 
 
----- Original Message -----
Sent: Monday, August 14, 2006 8:06 PM
Subject: RE: [ccp4bb]: MOSFLM 'output directory' option

Hi Nick:
 
You need to use two separate keywords:
 
 DIREctory -- which tells mosflm where the files are;  and
 TEMPlate -- which tells mosflm what the files look like.
 
And all output will be written into the working directory.
 
 
But if you do something like
 
 IMAGe /full/path/to/images/image####.osc
 
of
 
 TEMPlate /full/path/to/images/image####.osc
 
then it will take everything in front of the #### as the root for the files it's creating, so it ends up writing to the same directory as the images.
 
(Which is, incidentally, very bad practice.  Keep images and processing apart.)
 
Hope that helps.
phx.
 
 
 
 
 
 
 


From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Noinaj
Sent: 15 August 2006 00:29
To: [email protected]
Subject: [ccp4bb]: MOSFLM 'output directory' option

Hi,
 
 
I am trying to use MOSFLM to process data that is stored in a protected folder requiring root access --> /data.
 
While I have two options, either (1) get root access and continue processing or (2) copy the image files to my home directory and process from there.  I would prefer to just access the images files from there current location, but have all the output files from MOSFLM to go to a folder within my home directory, is this possible using MOSFLM?  (*similar to the options available in HKL2000).
 
I have searched the tutorials, guides and FAQs, but can't find anything to help.  None of the KEYWORDS seem to help either.  Thanks in advance for any and all feedback!
 
 
Cheers,
Nick
 
 
________________________________________
 
Nicholas Noinaj
University of Kentucky School of Medicine
Department of Molecular and Cellular Biochemistry
Biomedical Biological Sciences Research Building, Rm 236
741 S. Limestone
Lexington, Ky 40536
Lab:  859-323-8183
Home:  859-228-0978
[EMAIL PROTECTED]
www.noinaj.com
 
 

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